Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02347 ATGGTTAGCTGCAGATCTGTGTTACCCTTAGAACAAATGAAGGTTACAAATGAGGAGGGGCAAGTAAAGCATAATGACCTTTCCCAGAAAGTAATGGACAGTGGAAGAAGGAGAAGAAGAAGATCGGTTCGAGGACTCGGAGAGAAACTACCAGAAGCAGGACAGCTTGATTCAAGAGTGATCTCCACTTCTCATTGCAAAAGCCTCATGTTCCATGCCAGGCCTGGTTATGGTCATCTAGGGACTACGTGTTTAGTTAAAGCTAATCACTTCCTCGCAGAAATATCAGGGTTAGACGTAAGCCATTACAGCGTGAAAATAACACCTGAGGTTATTTCTCGTAGAACAAACAAAGCTATCATAAGCCAGTTGGTGAAACTTCGTAGAAACAGTGACCTAGGCATGAGGCTTCCTGTTTATGATGGAGGAAGAAACCTGTATACTGCTGGATTGCTGCCTTTTAAAACAAAAGACTTCACAGTCATACTGACTGAGGAAGATGAAGGAACAGTAAATATTCGGGAAAGGGAGTTTAGAGTGTCACTAAAGTTTGTAGCTCGAGTTAGCATGCATAGGCTAAATGAACTTCTGGGTGGTAAACAACTTGATACGCCTCAAGAAGCTCTTAGTGTCATTGACATTGTTTTAAGGGAACTAGTGGCTCAGAGTCATGTATCAATAGGAAAATTTCTATATTCTCCCCATATAAAGATACCCCAGAAGCTAGGCGGTGGCTTAGAATCATGGCGTGGCTTCTACCAGAGTATAAGGCCTACGCAAATGGGATTGTCTCTTAATATAGATATGTCATCCACGGTGTTCATTGAACCACTCCCTGTGATTGACTTTGTGGCTCAGATTTTGGGCAAGGACATTTTTTTAAAGCCATTGTCTGATGCAGATCGTGTCAAGGTCAAGAAAGCCCTTAGAGGTGTAAAAGTTGATATTACACACAGAGGAAATGTACGAAGAAAATATCGGATATCTGGATTGACATCACAGCCTACAAGAGAGTTAATTTTCCCACTTGATGAGCAAATGAACATGAAATCAGTTGTTGATTATTTTCAAGAGATGTATGGATATACCATTAAATACCCTCATCTACCTTGTCTTCAAGTAGGAAACCAGAAGAAGGTGAACTATTTGCCAATGGAGGCTTGCAAAATACTTGGAGGTCAGAGATACACAAAAGGGCTAAATGAAAAGCAAATAACATCACTGCTGAAGGTTTCATGCCAGAGACCTTATGAACAAGAGTTGGATATAATGCAGACAATCAATGACAATGATTATGAGCATAACCCCTATGCCAAGGAGTTCGGGATCAGTGTAGAGAACAAGCTTGCTGTTGTAGAAGCTCGGGTTCTTCCTGCTCCGTGGTTGAAGTATCATGACACGGGAAGAGAGAAGGAATACTTGCCTCAAGTTGGCCAGTGGAATATGTTGAACAAGAAGGTAATAAATGGAAGCAAAGTAAGTTACTGGGCATGTATCAATTTCTCTCGAAATGTACAAGAGACCACTGCCCGTGATTTTTGTCAACAGTTGGTTCAAATGTGCCAAATCTCTGGCATGGACATAAGCCAGGATCCTGTCATTCCTGTATACCCAGCAAGACCAGATCAGGTGAAGAAGGCTCTGAAGTTTGTCCATTGTGCTGCTTTGAACAAGCTTGAAGGGAAAGAACTGGAGTTGCTAATTGCGATTCTTCCAGATAACAATGGTTCTTTATACGGTGATCTGAAAAGAATCTGCGAAACTGATCTTGGTTTGATTTCTCAATGCTGTCTTACCAAACACGTCTTCAAACTCAGCAGACAGTACATGGCTAATGTAGCACTGAAAATTAACGTCAAGACGGGAGGAAGGAACACAGTACTGCTAGATGCTTTGCGGTGGAAGATTCCTTTGGTGAGTGACTTACCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATGTGGGGATGATTCTGCTCCATCTATTGCTGCTGTAGTAGCCTCCCAGGACTGGCCAGAAATTACAAAATATGCAGGGCTAGTAGGTGCTCAGCCTCATCGCGAAGAATTGATCCAAGACCTGTTTAAAACATGGAAAGATCCCCAACGTGGTACTACTGTTTGTGGTGGTATGATCAGAGAGCTTTTACTGTCATTTAAGAAGTCTACTGGACAAAAGCCACTCAGAATAATATTTTACAGAGACGGTGTGAGCGAAGGACAGTTCTACCAGGTATTGCTGTATGAACTTGATGCCATTCGCAAGGCTTGTGCATCGTTGGAGCCTAGTTACCAACCTCCAGTGACATTTGTTGTTGTTCAGAAGAGACACCATACCCGACTCTTTGCCAGCAATCACAGTGACAGAAATAGCGTCGACAAGAGTGGGAATATATTACCTGGGACCGTGGTGGACACCAAGATCTGTCATCCAACAGAGTTTGACTTTTATTTATGCAGTCATGCAGGAATCCAGGGTACTAGTCGACCTGCTCATTATCATGTTCTTTGGGACGAGAACCATTTTACTGCGGATGAGATTCAATCTCTGACCCACAATTTGTGCTACACTTACGCAAGGTGTACGCGATCTGTTTCAGTAGTGCCTCCCGCGTACTACGCTCATCTGGCAGCCTACAGAGCTCGATTCTATATGGAACCAGAGAATGTTAAATCACGAGAATCCAGACCAAGTAACACAACATGCGTTCGACCCCTACCTGCAATACAAGACAAGGTCAAGAATGTCATGTTTTACTGTTGA 2769 0.4265 MVSCRSVLPLEQMKVTNEEGQVKHNDLSQKVMDSGRRRRRRSVRGLGEKLPEAGQLDSRVISTSHCKSLMFHARPGYGHLGTTCLVKANHFLAEISGLDVSHYSVKITPEVISRRTNKAIISQLVKLRRNSDLGMRLPVYDGGRNLYTAGLLPFKTKDFTVILTEEDEGTVNIREREFRVSLKFVARVSMHRLNELLGGKQLDTPQEALSVIDIVLRELVAQSHVSIGKFLYSPHIKIPQKLGGGLESWRGFYQSIRPTQMGLSLNIDMSSTVFIEPLPVIDFVAQILGKDIFLKPLSDADRVKVKKALRGVKVDITHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFQEMYGYTIKYPHLPCLQVGNQKKVNYLPMEACKILGGQRYTKGLNEKQITSLLKVSCQRPYEQELDIMQTINDNDYEHNPYAKEFGISVENKLAVVEARVLPAPWLKYHDTGREKEYLPQVGQWNMLNKKVINGSKVSYWACINFSRNVQETTARDFCQQLVQMCQISGMDISQDPVIPVYPARPDQVKKALKFVHCAALNKLEGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKLSRQYMANVALKINVKTGGRNTVLLDALRWKIPLVSDLPTIIFGADVTHPECGDDSAPSIAAVVASQDWPEITKYAGLVGAQPHREELIQDLFKTWKDPQRGTTVCGGMIRELLLSFKKSTGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFASNHSDRNSVDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENHFTADEIQSLTHNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPENVKSRESRPSNTTCVRPLPAIQDKVKNVMFYC* 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02347 922 CDD PAZ_argonaute_like 277 391 - -
Pte1g02347 922 Pfam PAZ domain 304 408 IPR003100 GO:0005515
Pte1g02347 922 Gene3D paz domain 271 396 - -
Pte1g02347 922 FunFam protein argonaute 10-like 635 922 - -
Pte1g02347 922 Pfam Argonaute linker 2 domain 422 464 IPR032472 -
Pte1g02347 922 SMART Piwi_a_2 566 888 IPR003165 GO:0003676
Pte1g02347 922 FunFam Argonaute 10 456 629 - -
Pte1g02347 922 FunFam Protein argonaute-2 271 397 - -
Pte1g02347 922 SUPERFAMILY PAZ domain 272 432 IPR036085 GO:0005515
Pte1g02347 922 Gene3D - 456 629 - -
Pte1g02347 922 ProSiteProfiles PAZ domain profile. 278 392 IPR003100 GO:0005515
Pte1g02347 922 SMART DUF1785_2 225 277 IPR014811 -
Pte1g02347 922 MobiDBLite consensus disorder prediction 19 48 - -
Pte1g02347 922 Pfam Argonaute linker 1 domain 227 275 IPR014811 -
Pte1g02347 922 CDD Piwi_ago-like 436 887 IPR045246 -
Pte1g02347 922 Pfam Piwi domain 567 887 IPR003165 GO:0003676
Pte1g02347 922 Pfam N-terminal domain of argonaute 83 216 IPR032474 -
Pte1g02347 922 MobiDBLite consensus disorder prediction 19 33 - -
Pte1g02347 922 ProSiteProfiles Piwi domain profile. 566 888 IPR003165 GO:0003676
Pte1g02347 922 SUPERFAMILY Ribonuclease H-like 555 889 IPR012337 -
Pte1g02347 922 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 73 889 - -
Pte1g02347 922 Pfam Mid domain of argonaute 475 550 IPR032473 -
Pte1g02347 922 SMART PAZ_2_a_3 282 414 IPR003100 GO:0005515
Pte1g02347 922 Gene3D - 635 922 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02347 Pte-Chr1 44326753 44332903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02347 67 923 Eukaryotic Initiation Factors Gene Family AT5G43810 71.857 0.0 1341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02347 K11593 - gmx:100808457 1468.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02347 1 44326753 44332903 Pte1g02347 1 44326753 44332903 RCT