Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02344 ATGGCTAAAGTTCTTGTTGTCCATGGCTTTCGTGGTTGTTTGATGGTCTGCAACTTCACCTGTTTGGTTTCGCTGCTACTGATAGTATTGACTGGACGAGTCAAGGCGGAGCCGACTCAAGACAAGCAAGCACTCCTTGCTTTCCTTTCTCAAACCCCACATTCCAAACGTGTACAATGGAACGCATCTGACTCAGCCTGCAATTGGGTGGGAGTCGTTTGCGATTCAAACCGTACCTTCGTTAGCACGCTTCGTCTACCCGGTGTTGGTCTGGTGGGTCCGATTCCGGTTAACACAATTGGTCGTTTGACTCAGCTCCGGGTTCTTAGTCTTCGCGCCAATCGCATTTCCGGGCAGATCCCTTCGGATTTTGCGAATCTGACCTTCCTTCGTAGTCTTTACCTCCAAAACAATCAGTTGTCTGGCGACTTTCCGACCAGTATCACCCGTTTGACTCGTCTGACTCGGGTTGATCTCTCTTCAAACAACTTCACCGGTTCAATCCCTTTCTCCATCAACAACCTCACCCACTTGACTGCTCTGCTCTTGGAAAACAATGCCTTCTCCGGTAGCTTACCCAGCGTCACAGCTCAACTGGAAAAATTCAACGTTTCAAATAACCGTCTCAACGGTTCAATACCTACCACACTCGCTAAATTTCCAGCTTCCTCATTCACCGGCAATCTAGATCTCTGCGGCGGACCATTGCCACCCTGTAATCCCTTCTTTCCTGCTCCTGCTCCAGCTCCTTCTGGATTTTTACCACCATCTCCGGTCCACAAAAAGTCCAAGAAGCTTTCCACCCTCGCCATTGTCTTAATTGCAGTTGGTTGTTCTCTTCTACTCTTACTGTTGCTCCTCCTCCTATTTCTATTTCTACGGAAGCGCCAACGTCAGCAACCACCGAAACCACCTAAGCCTGTGATGCCAACAAGAGCTGTACCTGGGGAAGCTGGAACGTCCTCATCAAAAGATGACATTACTGGTGGGTCTACAGAGGCTGAGAGGAACAAGCTGGTATTCTTTGAAGGAGGGATGTACAGCTTTGATTTGGAGGATCTATTGAGAGCTTCTGCAGAAGTTTTGGGCAAAGGAAGCGTTGGGACTTCATACAAAGCAGTGTTAGAAGAAGGTACTACCGTAGTAGTGAAGAGATTGAAGGATGTTGTCGTGACCAAGAAAGAGTTCGAGACACAAATGGAGGTTCTAGGAAAGATCAAACACGACAATGTAGTTCCACTAAGAGCATTCTACTACTCCAAGGACGAGAAATTGCTTGTCTACGATTACCTGGCCGCCGGTAGCTTGTCGGCTCTGCTTCACGGAAGCAGAGGTTCCGGGCGGACCCCATTAGACTGGGACAACCGGATGAGAATAGCACTGAGTGCAGCTAAAGGCCTATCTCACCTACACGTGTCCGGAAAAGTTGTCCACGGCAATATCAAATCCTCCAACATACTCTTAAAACCCGATCACGATGCGTGCATTTCGGACTTTGGAGTGAACCCACTGTTCGGCACGTCCACGCCGCCAAACCGGGTCGCTGGCTATCGGGCACCCGAGGTGCTTGAAACCCGAAAGGTGACGTTCAAGTCGGATGTTTATAGCTTTGGCGTCTTGCTGCTTGAATTATTAACTGGGAAGGCGCCCAATCAAGCCTCTTTGGGAGAGGAAGGCATTGACCTCCCCAGGTGGGTTCAGTCCGTGGTACGCGAAGAGTGGACTGCTGAGGTCTTCGATGTAGAGCTAATGAGGTACCATAACATTGAAGAAGAGATGGTTCAGCTTTTGCAGATTGCTATGGCGTGCGTTTCGGTGGTACCTGATCAGAGACCGGATATGAGAGAAGTGGTGCGTATGATGGAGGATATGAATCGAGGGGAGACTACGGATGATGGGTTACGGCAGTCGTCCGACGATCCATCTAAAGGATCGGACGGTCATACGCCTCCGGCAGAATCAAGAACGCCCCCTACGTCGGTGACTCCATGA 1992 0.498 MAKVLVVHGFRGCLMVCNFTCLVSLLLIVLTGRVKAEPTQDKQALLAFLSQTPHSKRVQWNASDSACNWVGVVCDSNRTFVSTLRLPGVGLVGPIPVNTIGRLTQLRVLSLRANRISGQIPSDFANLTFLRSLYLQNNQLSGDFPTSITRLTRLTRVDLSSNNFTGSIPFSINNLTHLTALLLENNAFSGSLPSVTAQLEKFNVSNNRLNGSIPTTLAKFPASSFTGNLDLCGGPLPPCNPFFPAPAPAPSGFLPPSPVHKKSKKLSTLAIVLIAVGCSLLLLLLLLLLFLFLRKRQRQQPPKPPKPVMPTRAVPGEAGTSSSKDDITGGSTEAERNKLVFFEGGMYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEVLGKIKHDNVVPLRAFYYSKDEKLLVYDYLAAGSLSALLHGSRGSGRTPLDWDNRMRIALSAAKGLSHLHVSGKVVHGNIKSSNILLKPDHDACISDFGVNPLFGTSTPPNRVAGYRAPEVLETRKVTFKSDVYSFGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVSVVPDQRPDMREVVRMMEDMNRGETTDDGLRQSSDDPSKGSDGHTPPAESRTPPTSVTP* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02344 663 MobiDBLite consensus disorder prediction 623 663 - -
Pte1g02344 663 SUPERFAMILY Protein kinase-like (PK-like) 360 621 IPR011009 -
Pte1g02344 663 CDD STKc_IRAK 362 624 - -
Pte1g02344 663 ProSiteProfiles Protein kinase domain profile. 356 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02344 663 FunFam Probable inactive receptor kinase RLK902 38 196 - -
Pte1g02344 663 Gene3D Phosphorylase Kinase; domain 1 323 430 - -
Pte1g02344 663 Gene3D Transferase(Phosphotransferase) domain 1 431 642 - -
Pte1g02344 663 Pfam Leucine rich repeat 130 187 IPR001611 GO:0005515
Pte1g02344 663 PANTHER OS05G0588300 PROTEIN 21 635 - -
Pte1g02344 663 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 431 635 - -
Pte1g02344 663 MobiDBLite consensus disorder prediction 299 330 - -
Pte1g02344 663 Gene3D Ribonuclease Inhibitor 38 196 IPR032675 -
Pte1g02344 663 SUPERFAMILY L domain-like 41 220 - -
Pte1g02344 663 MobiDBLite consensus disorder prediction 623 642 - -
Pte1g02344 663 Gene3D Ribonuclease Inhibitor 198 239 IPR032675 -
Pte1g02344 663 FunFam pollen receptor-like kinase 1 325 430 - -
Pte1g02344 663 Pfam Protein kinase domain 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02344 663 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02344 Pte-Chr1 44302970 44306320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02344 20 648 Receptor kinase-like Gene Family AT5G58300 53.738 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte1g02344 Pkinase 5.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02344 - - qsa:O6P43_023032 967.222