Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02334 ATGGGTGGTGGTAGAAGAAGAAAACAGCATTTTGGTAAAATCCATGCCTTTACATGTGGGAAAGCCTCAATTAGAAGTGAGCATTCACTGATTGGAGGCCCTGGATTTTCAAGAGTGGTCTGCTGTAACGACCCGGAATGTCTTGATGCTCGAGTACTAAATTATCCTGACAATTATGTGAGAACTGCTAAATATACTTTAGCGACATTCTTGCCCAAGTCACTGTTTGAGCAATTCAGAAGGGTGGCAAATTTGTATTTCCTCATCTGTGCTATACTTTCTTTCACCCCACTTTCACCTTACTCATCAGTAAGCAATGTGATTCCACTTGTTGTTGTAATTGGGGCTACAATGGGCAAAGAGGCCCTAGAGGATTGGAGAAGAAAACAGCAGGAGATTGAGGTGAACAACAGAAAAGTCAAAGTACATTGCGGCGATGGTACATTCACCCATTCTAAGTGGATGGACTTAAAAGTTGGAGATGTAGTGAAGGTAGAGAAAGATGAATTCTTTCCTGCTGATCTCATCTTACTCTCATCAAGCTATGAGGATGCTATTTGCTATGTGGAGACGACAAACCTTGATGGAGAAACAAATCTTAAACTAAAACAAGGAACAGAGGCAACTTCTGACTTACATGATGATACGAGTTTTTTGAATTTTAAGGCTGTCATCAAATGTGAAGATCCGAATGCAAATTTGTATTCCTTCATTGGGAGTTTGGAGCTTGAAAATCAACAGCTTCCTCTCGCACCTCAACAGCTTCTGCTGAGGGACTCTAAATTGAGAAATACGGATTTTATTTATGGGGCGGTGATCTTCACTGGTCATGATACGAAGGTGGCTCAGAATTCAACAGAACCCCCTTCCAAAAGAAGCAAAATTGAGAAAAGGATGGATAAGATAGTGTATTTGTTGTTCTTTCTGTTGGTCTTGGTGTCTATACTGGGGTCAATTATCTTTGGGGTTGTAACAAGTGAGGACCTTGAAAATGGGAAGTTGAAAAGATGGTACTTGAGGCCAGATGATACCACTGTTTATTATAGTCCAAGAAGAGCAGCAGTTGCAGGAGTCTTGCAACTTTTCACAGCCCTTATGCTCTACAGTTATTTCATTCCTATTTCTCTGTACGTGTCAATAGAAATAGTTAAAGTTCTTCAGAGCGTTTTCATCAACCAGGATATCCATATGTATTATGAAGAAATAGATAAGCCAGCGCGAGCTCGAACATCGAATTTGAATGAAGAACTCGGCCAAGTTGACACTATACTTTCAGACAAAACTGGAACGTTGACTTGTAACTCCATGGAATTTATCAAATGTTCTATGGCTGGCATTGCCTATGGTCGTGGGGTTACAGAAGTTGAGAGAGCTCTAGCAAAGAGAATAGGATCACCTTTACTTCAAGAAATGGCAGAGAAGAATGATGACTTCAGAAATTCTACTGAAGGAAAACCGTCCATCAAGGGGTTTAATTTTAAGGATGAAAGGATCATGAATGGAAATTGGGTCCATGAACCTAATGCCAACGTAATCCAGAAGTTCCTCCGGTTACTAGCTCTCTGCCATACAGCATTACCCGAAATCGATGAAACTGGCAAAATTTCGTATGAAGCAGAATCACCGGATGAGGCAGCTTTTGTGATTGCAGCAAGAGAACTTGGTTTTGAGTTTTATGAGAGAACACAAACGAGCATTTCTCTCAGGGAATTGGATCCTGTCTCCGGTGTGAAGGTTCAAAGGTCTTACAAACTCTTGAATGTATTGGAGTTTAGTAGCGCGAGGAAGCGGATGTCTGTAATTGTGAGAAATGAGGAGGGAAAGTTATTGCTTCTTTGTAAAGGTGCTGACAGTGTCATGTTCGAAAGACTTTCAACAAATGGGAGGGAGTTTGAAGCGAAGACGAGAGAGCACATTAATGAGTATGGTGATGCTGGTTTGAGGACTTTGATACTTGCCTACCGTGAACTCGATGAGGATGAATACTCTGAATTCAGCAAGAAGTTCATGGAGGCAAAGAACTCTGTGAGTGCAGATAGGGATGAATTGGTGGAGGAGGTAGCAGAGGAGATTGAGAAAGATTTAATCCTTCTTGGTGCAACTGCAGTTGAAGACAAGCTTCAGAATGGGGTTCCTGAATGCATTGACAAACTAGCACAAGCTGGAATCAAAATATGGGTTTTGACTGGCGACAAAATGGAGACTGCTATCAACATAGGGTTTGCTTGTAGTCTGCTCCGACAAGGAATGAAGCAAATAGTTATCAGCTCAGAGACGCGAGAAGCCAAATCATTGGAGAAAGGGGAAGACAAATCTGCCGCAGCTGTGGCAATTAAGGAAAGTGTTCTTCGCCAGATAAGAGAGGGAAAGGCTTTGCTTGCAGCATCAAATGCAAATTCTGAGGCTCTAGCATTGATCATTGATGGAAAGTCACTCACTTATGCATTACAGGGCGATATCAAGGATCTATTTTTCGAACTAGCTATTGGTTGTGCCTCTGTTATATGTTGTCGCTCATCTCCAAAGCAAAAAGCACTGGTTGCGAGGCTGGTAAAACTAAGGACCCGAAAGACAACTCTAGCAATTGGCGATGGAGCTAATGATGTAGGTATGCTTCAAGAAGCAGATATAGGCATTGGCATTAGTGGCGTTGAAGGCATGCAGGCAGTGATGTCCAGTGACGTTGCAATTGCACAATTTCGATTTCTGGAACGCTTACTTCTTGTACATGGTCATTGGTGTTACAGAAGGATTTCATCAATGATTTGCTACTTCTTTTACAAAAACATCGCTTTCGGATTCACGCTCTTCTTCTTTGGAATATACGCATCATTTTCTGGACAAGCTGCCTACAATGATTGGTTTCTGTCGTTTTACAACGTGTTCTTCACCTCACTCCCTGTCATTGCCCTAGGAGTGTTTGACCAGGATGTATCTTCTCGATTATGTCTCAAGTTTCCACTATTATACCAAGAAGGAGTGCAGAATGTTCTATTTAGCTGGACTCGAATCATCGGCTGGGCACTTAATGGGGTCTCCAGTGCTGCCATAATCTTCTTCTTCTGTTACTTGGCAATGAAGGATCAAGCTTATCGTCATGGTGGCGAAGTTACAGACCTGGAGATATTTGGTGCTACCATATACACTTGTGTTGTGTGGGTAGTTAACTGTCAGATGGCTTTGTCCATTAGTCATTTCACATATATACAGCATATCTTCATCTGGGGTGGCATTCTGTTCTGGTATATATTTCTTTTGGCATATGGAGCTATCAATCCTTATCTGTCCACAACAGCCTACAAGGTCTTCATTGAAGCGTGTGCTCCAGCACCATCTTACTGGCTCATCACATTCTTTGTTCTTGTCTCCGCTCTCCTCCCATATTACACTTACGCGTCAATCCAGATGCGATTTTTCCCTATGTTCCATCAAATGATTCAGTGGATTAGAAGCGACGGGCAGTCAAATGATCCTGAATACTGTCAAATGGTTCGGCAGAGATCATTAAGGCATACTACTGTTGGCTACACCGCTCGCATTGAAGCAGCATCGAAACGTTTTGAATTGAAGCGTGAAGGCCATGGATGA 3588 0.4211 MGGGRRRKQHFGKIHAFTCGKASIRSEHSLIGGPGFSRVVCCNDPECLDARVLNYPDNYVRTAKYTLATFLPKSLFEQFRRVANLYFLICAILSFTPLSPYSSVSNVIPLVVVIGATMGKEALEDWRRKQQEIEVNNRKVKVHCGDGTFTHSKWMDLKVGDVVKVEKDEFFPADLILLSSSYEDAICYVETTNLDGETNLKLKQGTEATSDLHDDTSFLNFKAVIKCEDPNANLYSFIGSLELENQQLPLAPQQLLLRDSKLRNTDFIYGAVIFTGHDTKVAQNSTEPPSKRSKIEKRMDKIVYLLFFLLVLVSILGSIIFGVVTSEDLENGKLKRWYLRPDDTTVYYSPRRAAVAGVLQLFTALMLYSYFIPISLYVSIEIVKVLQSVFINQDIHMYYEEIDKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSMAGIAYGRGVTEVERALAKRIGSPLLQEMAEKNDDFRNSTEGKPSIKGFNFKDERIMNGNWVHEPNANVIQKFLRLLALCHTALPEIDETGKISYEAESPDEAAFVIAARELGFEFYERTQTSISLRELDPVSGVKVQRSYKLLNVLEFSSARKRMSVIVRNEEGKLLLLCKGADSVMFERLSTNGREFEAKTREHINEYGDAGLRTLILAYRELDEDEYSEFSKKFMEAKNSVSADRDELVEEVAEEIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIVISSETREAKSLEKGEDKSAAAVAIKESVLRQIREGKALLAASNANSEALALIIDGKSLTYALQGDIKDLFFELAIGCASVICCRSSPKQKALVARLVKLRTRKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDVAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFFGIYASFSGQAAYNDWFLSFYNVFFTSLPVIALGVFDQDVSSRLCLKFPLLYQEGVQNVLFSWTRIIGWALNGVSSAAIIFFFCYLAMKDQAYRHGGEVTDLEIFGATIYTCVVWVVNCQMALSISHFTYIQHIFIWGGILFWYIFLLAYGAINPYLSTTAYKVFIEACAPAPSYWLITFFVLVSALLPYYTYASIQMRFFPMFHQMIQWIRSDGQSNDPEYCQMVRQRSLRHTTVGYTARIEAASKRFELKREGHG* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02334 1195 NCBIfam phospholipid-translocating P-type ATPase 55 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pte1g02334 1195 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 490 700 IPR023299 GO:0000166
Pte1g02334 1195 PRINTS P-type cation-transporting ATPase superfamily signature 862 881 - -
Pte1g02334 1195 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pte1g02334 1195 Gene3D - 116 286 - -
Pte1g02334 1195 FunFam Phospholipid-transporting ATPase 540 698 - -
Pte1g02334 1195 Gene3D - 699 902 IPR023214 -
Pte1g02334 1195 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pte1g02334 1195 NCBIfam HAD-IC family P-type ATPase 828 945 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte1g02334 1195 SUPERFAMILY Calcium ATPase, transduction domain A 143 284 IPR008250 -
Pte1g02334 1195 Pfam Phospholipid-translocating P-type ATPase C-terminal 890 1140 IPR032630 -
Pte1g02334 1195 Pfam Cation transport ATPase (P-type) 521 625 - -
Pte1g02334 1195 FunFam Phospholipid-transporting ATPase 698 902 - -
Pte1g02334 1195 Pfam Phospholipid-translocating ATPase N-terminal 42 105 IPR032631 -
Pte1g02334 1195 FunFam Phospholipid-transporting ATPase 116 286 - -
Pte1g02334 1195 SFLD p-type atpase 408 913 IPR044492 -
Pte1g02334 1195 SUPERFAMILY Calcium ATPase, transmembrane domain M 50 1140 IPR023298 -
Pte1g02334 1195 SFLD Haloacid Dehalogenase 408 913 - -
Pte1g02334 1195 SUPERFAMILY HAD-like 412 907 IPR036412 -
Pte1g02334 1195 Gene3D - 556 698 IPR023299 GO:0000166
Pte1g02334 1195 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 39 1151 - -
Pte1g02334 1195 CDD P-type_ATPase_APLT_Dnf-like 57 1022 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02334 Pte-Chr1 43953412 43961012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02334 1 1185 Primary Pumps ATPases AT1G68710 69.540 0.0 1778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02334 K01530 - qsa:O6P43_022980 1953.72