Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02316 ATGTTGAGAGAGTTAATTCCACGTAGTGACCAAAAAAGGGACAAGGCATCATTCTTATTAGAGGTTATCGAGTATATTCACTTTTTACAAGAGAAGGTAAATAAGTACGAAGGATCGTTTCAAGTGTGGAAGGAACCGGAAAAATTAATGCCAATGATAAACAGTCCAAGGCCTGGAGAAAGTTTTGTTCACCAACCTTGTGGTGTGAAAACCGGCTCAACTCCAGCATTGTTGTTTGCTAGGAGGATTGATGAGAAAAATGTCACAACATCTCCAGCAATACCTATGACTGTACAACACCCAGTGGAGTTGGAAATGAACACTGCAACCAACTTAAAAGCAAGTGATCCACACTCTGGAACAACGAAGAAAGCCATGGCACTCCCTTTGCAGCCGAACTTCTTTACTCTTCTTGGTAGCAGTGGTGCAGTATCCCAGCTCCCACATAGACTGGCATCTGAAAATACGTCCCAGCCTCAACCTAGACAATCTCACACTTATGCTTGTGTTTCAGATGCCAGTGTTTCCGGTGATAAGTTGAAAGGAAAGGATTTGGCCAATGAAGGTGGTACCATTAGCGTCTCCAGTGTATACTCTCAAGGGTTGTTAAATACGCTAACTCAGGCTCTACAGAGTTCTGGAGTTGATTTATCTCAAGCAAGTATTTCCGTGCAAATTGAGCTAGGTAAACGAGCAAATATCAGTTCACAGGAGTTCTGTCACAAGGAGGGTGACATTCCAGCTTGCAATCAAGTGATGAAAGTTTCTACAGTTGCTAGGAGTGAGGAGTCTGACCAACCTTTGAAGAAGCTTAAGCAAGGTAAAAGCTAG 831 0.4284 MLRELIPRSDQKRDKASFLLEVIEYIHFLQEKVNKYEGSFQVWKEPEKLMPMINSPRPGESFVHQPCGVKTGSTPALLFARRIDEKNVTTSPAIPMTVQHPVELEMNTATNLKASDPHSGTTKKAMALPLQPNFFTLLGSSGAVSQLPHRLASENTSQPQPRQSHTYACVSDASVSGDKLKGKDLANEGGTISVSSVYSQGLLNTLTQALQSSGVDLSQASISVQIELGKRANISSQEFCHKEGDIPACNQVMKVSTVARSEESDQPLKKLKQGKS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02316 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 29 IPR011598 GO:0046983
Pte1g02316 276 Gene3D - 1 49 IPR036638 GO:0046983
Pte1g02316 276 Pfam Helix-loop-helix DNA-binding domain 2 30 IPR011598 GO:0046983
Pte1g02316 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 44 IPR036638 GO:0046983
Pte1g02316 276 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 273 IPR044295 GO:0003700|GO:0006351|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02316 Pte-Chr1 43847501 43849199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02316 1 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 39.464 1.31e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02316 - - qsa:O6P43_002261 288.885