Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02304 ATGGGGTTGTGTCTTTGTCTGTATACCGAGACTGGAAGTGGCACTTCGCAATCGAGAATGCAAGGCAATGGAAACGAACGAACTCCTCTTCGATCTAGACCGGAGTGTACGTCACGGCCTTGCAAAAGGGAAGAGAGGAAGAGGAACAATGCCTCAGGGGATGGTCAAGTCACAGACCTTGAACAAGGGGATGCAGTACCGGCAGCAAATGTAGGCTTTGGTCGCGTTCTTTCACTTGCAAAGCCCGATGCTGGAAAGCTGATAATTGCAACGGTTGCTCTACTAATTGCATCTACATCAAATCTTTTAGTTCCAAAATTTGGTGGGAAGATAATTGACATCGTTTCAGGCAATATCAATACTCCTGAACAGAAAACCAAAGCTTTGAGTGCTGTCAACAGCACCATAATTTATATTGTTCTAGTTGTTCTGATTGGTTCAGTTTGTGCAGCTCTTCGAGCTTGGTTGTTTTCTTCTGCTAGTGAAAGGGTTGTGGCTCGATTGAGAAAGAGATTATTCAGTCACCTCATTCGCCAGGAAATAGCCTTTTTTGATGTTACACGAACTGGGGAACTCCTTAGTAGATTGTCTGAAGATACACAAATCATTAAAAATGCTGCAACCACTAATCTCTCAGATGCCCTGAGAAACCTATCAACTGCTTTTATTGGTCTTGCCTTTATGTTTGCAACATCATGGAAGCTAACATTGTTATCTTTGGTAATTGTACCACCGATTTCGATTGCTGTACGTAAGTTTGGTCGATTTCTTCGTGAACTTTCTCACAAAACTCAAGCTGCAGCAGCAATAGCTGCTTCAATTGCTGAGGAATCTTTTGGTGCTGTACGAACTGTGAGGTCTTTTGCCCAAGAAGATTATGAAATATCACGCTATTCTGAGAAAGTTGATGAAACACTAAAGCTTGGACTTAAACAAGCTAAAGTTGTTGGCCTGTTTTCTGGAGGTCTTAATGCTGCTTCAACATTATCAGTTATGATAGTAGTTTTGTATGGAGCTAATTTGACAATCAGGGGTTCTATGTCTCCTGGTGATCTCACCTCATTTATTCTTTATAGCCTCACAGTGGGGAATGCCATATCTGGATTGTCGGGATTATACACAGCAGCAATGAAAGCTGCAGGTGCTAGCAGACGAGTCTTTCAACTTCTGGATCGTGAATCTAGCATGCCGAAATCAGGAGATAAATGTCCTCTGGGTGACCAAGATGGGGAAGTGGAGTTAGATGATGTCTGGTTTGCGTATCCATCTCGTCCTAATCATATGGTGCTTAAGGGTATTACAGTAAAATTACGGCCAGGATCAAAGGTTGCCCTTGTAGGACCAAGTGGTGGTGGAAAAACGACAATAGCAAATTTGATTGAGAGATTCTATGACCCAATCAAGGGGAAAATCTTGATAAATGGGGTTCCTCTGAGTGATATATCGCATTGTCATCTACACAAAAAGATCAGTATAGTGAGCCAGGAGCCTGTTCTTTTCAATTGCTCTATTGAGGAAAACATTGCTTATGGTATCGGTGGCAAAATTGACATTGCCAACATAGAAAATGCTGCTATAATGGCAAATGCACACGAGTTCATATCAAAATTTCCAGATAAATATCAAACTCATGTAGGAGAACGTGGCATAAGGCTTTCTGGAGGTCAGAAACAGAGGATAGCAATTGCCAGAGCCCTGCTTATGGATCCTAAAATTCTGCTGCTGGATGAAGCCACTAGTGCTCTTGATGCTGAAAGTGAATACCTAGTACAGGATGCCATGGACTCTTTGATGAAGGGACGGACAGTTCTGGTTATAGCTCATAGGTTATCAACTGTCAAGAGTGCAGATGTTGTAGCTGTTGTTTCTGAAGGCCAGATCGTTGAAAGTGGCACGCATGATGAACTCCTCGAGCAGAAAGGTGTTTATACTGCATTGGTAAGGAGACAACTGCAAACAGCGAAATCTGAAATCTAG 1977 0.4234 MGLCLCLYTETGSGTSQSRMQGNGNERTPLRSRPECTSRPCKREERKRNNASGDGQVTDLEQGDAVPAANVGFGRVLSLAKPDAGKLIIATVALLIASTSNLLVPKFGGKIIDIVSGNINTPEQKTKALSAVNSTIIYIVLVVLIGSVCAALRAWLFSSASERVVARLRKRLFSHLIRQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSDALRNLSTAFIGLAFMFATSWKLTLLSLVIVPPISIAVRKFGRFLRELSHKTQAAAAIAASIAEESFGAVRTVRSFAQEDYEISRYSEKVDETLKLGLKQAKVVGLFSGGLNAASTLSVMIVVLYGANLTIRGSMSPGDLTSFILYSLTVGNAISGLSGLYTAAMKAAGASRRVFQLLDRESSMPKSGDKCPLGDQDGEVELDDVWFAYPSRPNHMVLKGITVKLRPGSKVALVGPSGGGKTTIANLIERFYDPIKGKILINGVPLSDISHCHLHKKISIVSQEPVLFNCSIEENIAYGIGGKIDIANIENAAIMANAHEFISKFPDKYQTHVGERGIRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSADVVAVVSEGQIVESGTHDELLEQKGVYTALVRRQLQTAKSEI* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02304 658 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 650 IPR027417 -
Pte1g02304 658 FunFam ABC transporter B family member 25 139 409 - -
Pte1g02304 658 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 50 655 IPR039421 -
Pte1g02304 658 FunFam ABC transporter B family member 25 410 652 - -
Pte1g02304 658 SUPERFAMILY ABC transporter transmembrane region 75 393 IPR036640 GO:0005524|GO:0016020
Pte1g02304 658 MobiDBLite consensus disorder prediction 12 59 - -
Pte1g02304 658 MobiDBLite consensus disorder prediction 32 52 - -
Pte1g02304 658 Pfam ABC transporter transmembrane region 87 363 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte1g02304 658 Gene3D - 410 654 IPR027417 -
Pte1g02304 658 SMART AAA_5 439 632 IPR003593 GO:0016887
Pte1g02304 658 Gene3D ABC transporter type 1, transmembrane domain 137 409 IPR036640 GO:0005524|GO:0016020
Pte1g02304 658 ProSitePatterns ABC transporters family signature. 552 566 IPR017871 GO:0005524|GO:0016887
Pte1g02304 658 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 88 378 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pte1g02304 658 CDD ABC_6TM_AtABCB27_like 90 386 - -
Pte1g02304 658 MobiDBLite consensus disorder prediction 12 31 - -
Pte1g02304 658 Pfam ABC transporter 430 580 IPR003439 GO:0005524
Pte1g02304 658 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 412 649 IPR003439 GO:0005524
Pte1g02304 658 CDD ABC_MTABC3_MDL1_MDL2 412 650 - -
Pte1g02304 658 PIRSF ABC_prm/ATPase_B 21 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02304 Pte-Chr1 43745835 43752116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02304 89 650 Calmodulin-binding Proteins AT2G36910 36.907 1.49e-102 338