Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02300 ATGAATGTGATGTTAGCAAATTCAAGAGAGGAAGCTTCTAAAGCCAAGCAAGGGGGTGACACCGGTTGCCTTAAATTTTTAAAACCCTCAAATTCTAGACAGTGGTCAGGACACAGAAATCCAAGAATAGTAAGAGTCTCACGAACCTTCGGAGGCAAAGACAGACATAGCAAAGTTTGCACTATTAGGGGACTAAGAGACAGGCGGATTAGGCTTTCGGTACCGACAGCAATTCAGTTGTATGATCTTCAAGATAGGCTTGGGCTTGGTCAGCCAAGTAAAGTGATTGATTGGCTGCTTGAAGTCACTAAACTCGATATTGATAAGCTCCCACCACTTCAGATTCCTCAAGGATTTGATCAATTTTATCCACATCCAATGGTGCTGGCTCATGAATCAAGTGCCTCGCAGCCTTCTCTTCCTCCCAGCTTCTTTGATGTTACTTCAGCATTTAACGCAAAGGATGAGGGAGATCATGGCCTCATTACAAAATCGAAATATTGGGATGTTGGTTTTTTGAAAGGTAAGGAAGAAGATAGAAGACGATCTATAGCTGACAAAGGAAAGTGGACTAAAACAACTGAAGAACTAGAAAAGCAAGATGGTGTCAGTGGTTACTGCAGTCAGATGTCAGCTCAGAATTTTTTCTCCTCTACCAGTCAGTCTCTTTTACCATTACCGAGCAAGGCCATCACATATAGCTCTTACCATCCGGTAGAGCCTTCAAGTTTGTCTCTCTCTCAGTTTGGAATCCATGGAACGATGTCCTCCCCATCAGAACCCAATAATGGCAGTGTTGTGTCGTTCCCGACCGCATTACCAGTGTCATTTGCAGGTTCTCAATTATTTGTCTGTCCATCATCAGCTAGTGCAACAGTTTCACCAGCTTTTGCTTCATATCCCCCATACATGAGTACCTCGGTGAACAGTGACCCTAGACTGTTCAATCATGTTCAGTTACTGAGCTCAAGTTCGCAACTACTGCCTCATTCTCTCATACCGTCTATATACATGAATTCACCTCTTAAATCCTTTCCATCTCAATTAGATACCAAACTTCCTGGCTCTGAAATTCAGAACCAAAGCCAACTGAATAAGGACAAGTGTGGTTCCAAGTTCTGA 1122 0.4296 MNVMLANSREEASKAKQGGDTGCLKFLKPSNSRQWSGHRNPRIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLGQPSKVIDWLLEVTKLDIDKLPPLQIPQGFDQFYPHPMVLAHESSASQPSLPPSFFDVTSAFNAKDEGDHGLITKSKYWDVGFLKGKEEDRRRSIADKGKWTKTTEELEKQDGVSGYCSQMSAQNFFSSTSQSLLPLPSKAITYSSYHPVEPSSLSLSQFGIHGTMSSPSEPNNGSVVSFPTALPVSFAGSQLFVCPSSASATVSPAFASYPPYMSTSVNSDPRLFNHVQLLSSSSQLLPHSLIPSIYMNSPLKSFPSQLDTKLPGSEIQNQSQLNKDKCGSKF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02300 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 16 306 IPR005333 GO:0003700
Pte1g02300 373 MobiDBLite consensus disorder prediction 348 373 - -
Pte1g02300 373 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Pte1g02300 373 MobiDBLite consensus disorder prediction 1 23 - -
Pte1g02300 373 Pfam TCP family transcription factor 52 163 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02300 Pte-Chr1 43717793 43719934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02300 36 325 TCP Transcription Factor Family AT5G60970 42.857 7.64e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pte1g02300 TCP 1.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02300 - - qsu:112017684 365.54