Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02295 ATGAAAAGTGTAAAAAATATCCAGAAGATTACAAAGGCTATGAAGATGGTTGCAGCATCAAAGCTGAGAGCGATCCAGACTAGAGCTGAAAATTCTCGTGGACTATGGCAGCCATTTACTGCTCTTCTTGGTGACACTCCAAGTGTTGATGTTAAGAAGAACGTTATTGTGACCATTTCATCCGACAAGGGCCTTTGTGGTGGAATCAATTCCACGTCAGTCAAAATAAGCAAGGCTTTGCATAAATTGAGCTCTGGTCCTGAAAAAGAAACAAAGTACGTAATTTTGGGAGAGAAGGCAAAGGTTCAAATGGTGCGTGACTCTAAAAAGGATATTGAGATTTCCATAACTGAGCTGCAGAAAAATCCTTTGAATTATACCCAGGTCTCTGTTCTTGCAGATGACATCTTGAAGAATGTAGAATATGATGCTTTAAAGATTGTCTTCAACAAGTTTAACTCTGTTGTCTCATTTCTGCCAACTGTATCAACTGTATTATCCCCTGAGATTGTCGAGCGAGAGGCAGAATTAGGGGGAAAACTTGGTGACCTAGACTCCTATGAGATCGAAGGTGGAGAAACAAAGGCAGAAATACTTCAGAATCTGGCTGAATTCCAGTTTTCTTGCGTCTTGTTTAATGGGGCATTGGAGAATGCTTGCAGTGAGCAAGGGGCCAGAATGTCTGCCATGGATAGCTCTAGCAGAAATGCTGGAGAAATGCTTGACCGTCTCACGCTCACTTATAACAGAACTCGCCAAGCATCAATCACTACTGAATTGACCGAAATTATTTCTGGAGCATCAGCTTTGGAGGGCTAA 819 0.4176 MKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIVTISSDKGLCGGINSTSVKISKALHKLSSGPEKETKYVILGEKAKVQMVRDSKKDIEISITELQKNPLNYTQVSVLADDILKNVEYDALKIVFNKFNSVVSFLPTVSTVLSPEIVEREAELGGKLGDLDSYEIEGGETKAEILQNLAEFQFSCVLFNGALENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELTEIISGASALEG* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02295 272 Pfam ATP synthase 1 270 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 CDD F1-ATPase_gamma 1 267 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 Gene3D - 17 229 - -
Pte1g02295 272 PRINTS ATP synthase gamma subunit signature 51 70 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 PRINTS ATP synthase gamma subunit signature 217 236 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 PRINTS ATP synthase gamma subunit signature 248 269 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 PRINTS ATP synthase gamma subunit signature 143 160 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 FunFam ATP synthase gamma chain 225 267 - -
Pte1g02295 272 NCBIfam ATP synthase F1 subunit gamma 1 270 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 1 270 IPR035968 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 PIRSF ATP_synthase_gamma 1 270 - -
Pte1g02295 272 PANTHER ATP SYNTHASE GAMMA CHAIN 1 270 IPR000131 GO:0015986|GO:0045261|GO:0046933
Pte1g02295 272 ProSitePatterns ATP synthase gamma subunit signature. 256 269 IPR023632 -
Pte1g02295 272 Gene3D ATP synthase, gamma subunit, helix hairpin domain 1 267 - -
Pte1g02295 272 FunFam ATP synthase subunit gamma 17 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02295 Pte-Chr1 43674197 43678613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02295 1 270 Primary Pumps ATPases AT1G15700 28.349 7.98e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02295 K02136 - nnu:104597951 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02295 1 43674197 43678613 Pte1g02295 1 43674197 43678613 RCT