Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02293 ATGGCTTCGGGAAAGCGATGCCACTATGAAGTTCTCGGCCTCCAGCGCGACTGTTCGGCCGATGAAATCCGATCGGCTTATAGGCGGCTTGCCTTGCAGCGCCATCCTGATAAGCTCGTCCAGTCAGGCTTGTCCCAGGCCGAAGCCACCGCTCAATTCCAAGAACTCCAACACGCTTACGAGGTGCTATCCGATTCCAAGGAACGAGCTTGGTACGACTCTCATCGCTCCCAAATCCTCTTCTCCGATCCCTCCTCGGTTGGGAACTCGGTACCCAACTCAGTCATCCCTAACCTCTTCTCCTTCTTCTCGAGCACGGTATACTCGGGCTATACGGATTCGGGAAAGGGTTTTTACAAGGTTTATTCGGATGTGTTTGATAAGATACATTCCAATGAGCTCAATTTCGCTAGGACGTTAGGCTTATGTATTGATTCGGTCCGTCAAGCTCCGGTAATGGGGAACTTGGATAGTCCCTATACGCAGGTAACTGCGTTTTATAATTATTGGTTTTCGTTTTCTACTGTGATGGATTTTTGTTGGGTGGATCAGTACGATGTCATGGCTGGTCCGAACCGGAAGTCGAGACGGGTCATGGAGGAGGAGAACAAAAAGCTTAGGAAAAAGGCGAAGAAAGAGTACAATGAGACGGTTCGTAGGTTGGCAGAGTTTGTGAAGAAGAGAGATAAGCGAGTGATAGACATGACGATGAAGAAAAATATCGAGATGGAGAAGAAAAAAGAGGAGGAGAGAGAAAGGAAGAAGAAGTTGGAGAAGGAGAAGAAGGAGAAGGCAATGGCCTACGAGGAGCCTGAGTGGGCGAAGGTCGAGGAGGAGGACGAGGAGCATTGGTTTGAGGAGGACGAGGAGGATAAGAAAAGTGTCGGTAAAGAATTGTATTGCGTGGTTTGTGGGAAGAAGTTCAAGAGTGAGAAACAGTGGAAGAATCATGAGCAATCAAAGAAGCATAAGGAGAAAGTTGCTGAATTTCGGGACTCACTTGTTGATGATGAGGCTTTGGAAGTTGAAGTAGATGAAGAGGGGGTACGAACTGATGCTGATGGAGCTGACGAAAAGGATCAGAAGTCCACTGTGGTGGATGATTTGCAAGACAGCATTAGAGATGGTCTACGCATAGCAGAAGAAGAAAGTGGAGACGGGAATGAGTTAAGTCAAGGGGATGACACTGCTTTTTTGGATGATGAAGATGATACTAAAGATAGGATGACAGAGTCATTGGGACATGTTGTTGACGGTGACGAGGATGACGACATGGGTGTTCTCCAAGCCATGGTGGCTGGTCATAAGAGTAAAAAGAGTAAGGCTGGGAGGCGTGAGGCAAAGTCTGGTAGGACTTCAACTCAAGTTGTGAATGAGGATGAGCATGCTGTCGATCTAGAGTATAATAATAGTAAGAGCACGAGGAAGAATCGTAGAGCCAAGAAAGATAAGGGTAAAATGGATAGAGAAGAGACATCAATGGCTGCTCTCAGTGATTACACTAAACATGCTGAAAGTAATGGCACTGCAAGGGAAGAGTTTTCCTCTCAAATTTTGATGGAAGATGATACAAATGGCAAAGAGCATAAGCTGTTAGATAAAGATAAGGAGATTACAGATCAACCTCTTGCTAGAAAAGAGTTCGCTAAGGACACGAGCACCAAAGTAAAGAAGTCTTCCAAAGGGAAAAGCTCCAAGGTAATACTAGTAGTAGGTGAGTTTTTCACCTTGTTGTTTGTTATGGATTTGCGTTGTATCATAGCTGAGAGATTGTCTTTTGCCTCTTCATTTGTGTATGGTCCTATTTCGCTCTGGCGTTTTCTTGTCTGGTTGTTTTACTTTTTAAGTGCCAAGTTTAGTGTTTCGGAATCAAGTTAA 1878 0.4526 MASGKRCHYEVLGLQRDCSADEIRSAYRRLALQRHPDKLVQSGLSQAEATAQFQELQHAYEVLSDSKERAWYDSHRSQILFSDPSSVGNSVPNSVIPNLFSFFSSTVYSGYTDSGKGFYKVYSDVFDKIHSNELNFARTLGLCIDSVRQAPVMGNLDSPYTQVTAFYNYWFSFSTVMDFCWVDQYDVMAGPNRKSRRVMEEENKKLRKKAKKEYNETVRRLAEFVKKRDKRVIDMTMKKNIEMEKKKEEERERKKKLEKEKKEKAMAYEEPEWAKVEEEDEEHWFEEDEEDKKSVGKELYCVVCGKKFKSEKQWKNHEQSKKHKEKVAEFRDSLVDDEALEVEVDEEGVRTDADGADEKDQKSTVVDDLQDSIRDGLRIAEEESGDGNELSQGDDTAFLDDEDDTKDRMTESLGHVVDGDEDDDMGVLQAMVAGHKSKKSKAGRREAKSGRTSTQVVNEDEHAVDLEYNNSKSTRKNRRAKKDKGKMDREETSMAALSDYTKHAESNGTAREEFSSQILMEDDTNGKEHKLLDKDKEITDQPLARKEFAKDTSTKVKKSSKGKSSKVILVVGEFFTLLFVMDLRCIIAERLSFASSFVYGPISLWRFLVWLFYFLSAKFSVSESS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02293 625 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 2 567 IPR044648 -
Pte1g02293 625 Coils Coil 196 227 - -
Pte1g02293 625 Coils Coil 233 267 - -
Pte1g02293 625 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Pte1g02293 625 SMART dnaj_3 6 68 IPR001623 -
Pte1g02293 625 SUPERFAMILY Chaperone J-domain 4 83 IPR036869 -
Pte1g02293 625 PRINTS DnaJ domain signature 27 42 IPR001623 -
Pte1g02293 625 PRINTS DnaJ domain signature 48 68 IPR001623 -
Pte1g02293 625 PRINTS DnaJ domain signature 9 27 IPR001623 -
Pte1g02293 625 MobiDBLite consensus disorder prediction 402 422 - -
Pte1g02293 625 MobiDBLite consensus disorder prediction 352 385 - -
Pte1g02293 625 Pfam DnaJ domain 8 73 IPR001623 -
Pte1g02293 625 ProSitePatterns Zinc finger C2H2 type domain signature. 301 323 IPR013087 -
Pte1g02293 625 SUPERFAMILY beta-beta-alpha zinc fingers 296 338 IPR036236 -
Pte1g02293 625 Gene3D DnaJ domain 1 86 IPR036869 -
Pte1g02293 625 MobiDBLite consensus disorder prediction 244 263 - -
Pte1g02293 625 CDD DnaJ 7 65 IPR001623 -
Pte1g02293 625 MobiDBLite consensus disorder prediction 458 474 - -
Pte1g02293 625 Gene3D Classic Zinc Finger 286 344 - -
Pte1g02293 625 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Pte1g02293 625 SMART ZnF_U1_5 296 330 IPR003604 GO:0003676|GO:0008270
Pte1g02293 625 MobiDBLite consensus disorder prediction 335 492 - -
Pte1g02293 625 Pfam Zinc-finger double-stranded RNA-binding 299 324 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02293 Pte-Chr1 43665148 43667919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02293 3 488 C2H2 Transcription Factor Family AT1G74250 58.859 9.76e-167 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte1g02293 DnaJ 1.3e-21 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02293 K09506 - qsa:O6P43_022906 649.047