Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02276 ATGCAAGCCGGGTATGATATCAATGAACTGTTTCGTGAAGCTCAGTCACGGTGGTTGAAACCTGCAGAAGTTCTCTACATTTTGCAAAATCATGAGCAGTACCAGTTCACTAATGAGCCTCCTAATAAGCCAACCAGTGGATCATTGTATCTATTTAACAGAAGAGTACTTCGGTTCTTCCGAAAAGATGGTCATAATTGGCGCAAGAAGAGGGATGGAAGAACTGTAGGGGAAGCACATGAACGGCTGAAGGTTGGAAATGTGGAAACTTTAAATTGTTATTATGCACATGGGGAGGATAATCCCGATTTCCAAAGACGAAGCTTTTGGATGTTGGACCGGGAATATGATCACATTGTGCTTGTACATTACAGAGCCACAAAAGGAGAGAAGACCAGTTCTGGATCCGTTGCTCAGTTATCTTCAGGATCTTCTTCTAGTTTCAATCCTTGTCCTATGTTATATGTCAATCAGAATCCAGGCTCAACATCTATGTTTAGCGATTTATGTGAACCATATCAGAATTTCTCCAGCCCTGGGTCCATAGAAGTTACTTCTAATGTTGCCATCTCTAACCATGGGATAGACAATTTAGATGACATAGATGGAACAGTTGGGTCGGTAATGTCACATGATAGTGAGGTTAGTCAAGCTTTGCGCAGGCTGGAGGAGCAGCTAAGTTTAAATGAGGACAGCATCAAAGAAGTTCCGCCTTTTACTGATGATTATGAGAATTCAAATGATATAAATCTTTATGAAAACAAAAGAGACATCTTGAAGGAAGAGAATGGTGTGGATCTTTATGGACCTGATGAACGTATACATAATCATAGTCGATTGAATAGCACACAAGGTTACAATGAACAATCTAATTACATTGATGGAAATGGCAAGGGAATGTCCTGGAATGAGGTGCTGGTTTCATGTCAAGCTTCATCAGTAATGGGGTGTCAAGGGGAACAGGAAATATCAATTTCTGCAGTAAGGGGCGACCAGTGTAGAAATGATTGGCTCAGTTTCCATCAAAGTGATGTCAAAAGCTCTTCTCCTTGCTCATATCAACAAGGTAATGCTATCAACTTACCTCCACGTGCTTCTATGATGGGAAGTCAAGAAGCCAATTCTGATTACTGCAGATTGCTATTTGACCAAGACCGTGTTGAAATGCCACTAGAAGGAGTTTCAAGCTTGACTATTGCACAAGAACAAAAATTTACAATCAAGGAAGTATCACCAGAGTGGGGCTATGCCACTGAGGCCACCAAGGTCATTATAGTTGGATCTTTTCTTTGCGATTCCTCTGAATCATCTTGGAAATGTATGTTTGGAGATGTTGAAGTTCCTGTTAACATAGTTCAAGGAGGGGTAATCCGCTGTGAAGCTCCTCCTCACTTCCCAGGAAAAGTCACACTCTGTGTTACTTCTGGAAATCGAGAATCTTGTAGTGAAGTCAGAGAGTTTGAGTATCGTACTATGACCAGTAGCTGTTCACGTTGTGATTTATCTCCATTGGAGGCTACTAGAAGTCCGGAGGAACTTCTGTTACTAGTTAGATTTGTTCAGATGCTTCTTTCTGACTCATCAAGTAAGAACGAGAGCTCAGATTCAGGCATTGCTTTACTCAGGAGACAGAAAGCTGATGATGAATCATGGAGTCATACTATTGATGCTCTTCTATTTGGCAGTGAAACCTCGTCTGCTACTCTTGACTGGCTTCTCGAACAGCTTTTAAAGGATAAATTGTGCCATTGGCTGTCATGTAGATCTCAGCAAAGTAGCGAACAGGCAGGCTGTTCATTATCCAAGAAAGAGCAAGGGCTAATACACATGGTTGCTGGGTTGGGGTTTGAGTGGGCATTGAACCCTATTCTTAGTTGTGGTGTTAATGTAAATTTTCGTGACATTAATGGGTGGACTGCTCTGCATTGGGCTGCACGTTTTGGGAGGGAAAAAATGGTTGCCGCTCTTATAGCCTCTGGTGCTTCGGCAGGGGCTGTGACAGATCCCAGTGCTCTAGATCCTACAGGTAAAAATGCTGCATCTATTGCAGCCAGCTGTGGGCACAAAGGACTTGCTGGTTATCTTTCAGAGGTTGCATTAACTACTCACCTCTCGTCTCTTACGCTGGAAGAAAGTGAGCTTTCTAAAGGTTCTGCAGAGGTTGAAGCAGAGTTGACGATCAATAAAATCTCGGAGACAAATTTTACTGTCAATGATGATCAACTTTCACTCAAACACACCCTTGCGGCTGTTCGAAATGCTGCTCAGGCAGCTGCACGTATCCAGTCTGCTTTTCGTGCACATTCTTTCCGGAAACGTAGACAAAAGGAATCTGCTGTCAAGGATTATGATATCACCGGTGATGATGTTGACGACTTTCCTGAGCTATCTGTCCTTTTGAAACACAGCTTCCCTAATTCACGCGCTTATAATTCAGCTGCCTTGTCTATTCAAAAGAAATATCGAGGTTGGAAAGGTCGTAAAGATTTCTTGGCTCTACGCCAAAAAGTTGTGAAGATTCAGGCTCATGTTAGAGGCTACCAGGTGAGGAAACAGTACAAGGTAATTTGTTGGGCTGTGGGCATTCTTGATAAGGTCGTATTACGTTGGCGACGTAGAGGAGTTGGTTTAAGAGGTTTCAAGAGGGACTCAAATATTATTGATGAGGATGAAGATGAAGATGAGGACATTCTCAAGGTGTTCAGGAAACAAAAAGTTGATGTAGCTGTCAATGAGGCTGTCTCTCGCGTCCTCTCCATGGTCGAGTCTCCAGAGGCACGTCAGCAATATCAGCGCATGCTTGAGAAATATCATCAAGCTAAGGCTGAAATGGGCAGCACAAGCAATGAAGCAACATTATCTACTCCTGAGGTTTCTTCCAGTTTGATGGACGACGACTTATGTCAGTTACCCTAG 2916 0.4276 MQAGYDINELFREAQSRWLKPAEVLYILQNHEQYQFTNEPPNKPTSGSLYLFNRRVLRFFRKDGHNWRKKRDGRTVGEAHERLKVGNVETLNCYYAHGEDNPDFQRRSFWMLDREYDHIVLVHYRATKGEKTSSGSVAQLSSGSSSSFNPCPMLYVNQNPGSTSMFSDLCEPYQNFSSPGSIEVTSNVAISNHGIDNLDDIDGTVGSVMSHDSEVSQALRRLEEQLSLNEDSIKEVPPFTDDYENSNDINLYENKRDILKEENGVDLYGPDERIHNHSRLNSTQGYNEQSNYIDGNGKGMSWNEVLVSCQASSVMGCQGEQEISISAVRGDQCRNDWLSFHQSDVKSSSPCSYQQGNAINLPPRASMMGSQEANSDYCRLLFDQDRVEMPLEGVSSLTIAQEQKFTIKEVSPEWGYATEATKVIIVGSFLCDSSESSWKCMFGDVEVPVNIVQGGVIRCEAPPHFPGKVTLCVTSGNRESCSEVREFEYRTMTSSCSRCDLSPLEATRSPEELLLLVRFVQMLLSDSSSKNESSDSGIALLRRQKADDESWSHTIDALLFGSETSSATLDWLLEQLLKDKLCHWLSCRSQQSSEQAGCSLSKKEQGLIHMVAGLGFEWALNPILSCGVNVNFRDINGWTALHWAARFGREKMVAALIASGASAGAVTDPSALDPTGKNAASIAASCGHKGLAGYLSEVALTTHLSSLTLEESELSKGSAEVEAELTINKISETNFTVNDDQLSLKHTLAAVRNAAQAAARIQSAFRAHSFRKRRQKESAVKDYDITGDDVDDFPELSVLLKHSFPNSRAYNSAALSIQKKYRGWKGRKDFLALRQKVVKIQAHVRGYQVRKQYKVICWAVGILDKVVLRWRRRGVGLRGFKRDSNIIDEDEDEDEDILKVFRKQKVDVAVNEAVSRVLSMVESPEARQQYQRMLEKYHQAKAEMGSTSNEATLSTPEVSSSLMDDDLCQLP* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02276 971 Gene3D - 518 701 IPR036770 -
Pte1g02276 971 ProSiteProfiles IQ motif profile. 754 782 IPR000048 GO:0005515
Pte1g02276 971 Pfam CG-1 domain 13 126 IPR005559 GO:0003677
Pte1g02276 971 Gene3D - 810 857 - -
Pte1g02276 971 ProSiteProfiles Ankyrin repeat region circular profile. 636 662 - -
Pte1g02276 971 MobiDBLite consensus disorder prediction 944 962 - -
Pte1g02276 971 SMART ANK_2a 636 665 IPR002110 GO:0005515
Pte1g02276 971 FunFam Calmodulin-binding transcription activator 2 400 493 - -
Pte1g02276 971 SMART iq_5 832 854 IPR000048 GO:0005515
Pte1g02276 971 SMART iq_5 809 831 IPR000048 GO:0005515
Pte1g02276 971 SMART iq_5 753 775 IPR000048 GO:0005515
Pte1g02276 971 SMART CG_1_2 10 128 IPR005559 GO:0003677
Pte1g02276 971 ProSiteProfiles IQ motif profile. 833 857 IPR000048 GO:0005515
Pte1g02276 971 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 943 - -
Pte1g02276 971 MobiDBLite consensus disorder prediction 944 971 - -
Pte1g02276 971 SUPERFAMILY E set domains 406 490 IPR014756 -
Pte1g02276 971 FunFam Calmodulin-binding transcription activator 4 isoform A 517 701 - -
Pte1g02276 971 Pfam IQ calmodulin-binding motif 812 830 IPR000048 GO:0005515
Pte1g02276 971 Pfam IQ calmodulin-binding motif 835 854 IPR000048 GO:0005515
Pte1g02276 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 861 IPR027417 -
Pte1g02276 971 Pfam Ankyrin repeats (3 copies) 615 696 IPR002110 GO:0005515
Pte1g02276 971 CDD IPT 406 491 - -
Pte1g02276 971 FunFam Calmodulin-binding transcription activator 2 809 857 - -
Pte1g02276 971 Pfam IPT/TIG domain 406 489 IPR002909 -
Pte1g02276 971 SUPERFAMILY Ankyrin repeat 606 698 IPR036770 -
Pte1g02276 971 ProSiteProfiles Ankyrin repeat profile. 636 668 IPR002110 GO:0005515
Pte1g02276 971 ProSiteProfiles CG-1 DNA-binding domain profile. 7 133 IPR005559 GO:0003677
Pte1g02276 971 ProSiteProfiles IQ motif profile. 810 839 IPR000048 GO:0005515
Pte1g02276 971 Gene3D Immunoglobulins 400 495 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02276 Pte-Chr1 43518003 43528636 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02276 5 947 CAMTA Transcription Factor Family AT1G67310 53.030 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pte1g02276 CG-1 3.3e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02276 K21596 - gmx:100786880 1150.19