Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02273 ATGAGTTTGCTTCATGTGTTTGGATATGGTTTGAAGTTAGGGGGTCGTCTATTTTGGTTGCTATGGTGTTTCACCGTGTCTTTAATTTACATGAACTGGTTCGTTAGTGGTGGAATTATGGAAACCAGGACTTCTTTGCTCAGTAATGGTGATAAGATGTGGCTCAAATGGTGGGAAAAGAAAGTCCTTCATAACTATTACCTGTATTTAGGATCTAAGAAAGTCAGGAGAGCATTATGGAGAAAGCTTTTAGTCGCTTGGGTTATTGGTTGGACCATGGGTTCTATATGTATCTTCTTGTACTTGAGCTCTCAAGCTACTGAAAAGAGGAAAGAGACTCTTGCAAGTATGTGTGATGAGAGGGCTAGGATGTTGCAGGATCAATTCAATGTGAGCATGAACCATATTCAAGCCATGTCCATTTTGATCTCCACATTCCACCATGGAAAAAGCCCTTCTGCTATTGATCAGAGAACATTTGCCAGGTATACTGAGAGAACTGCTTTTGAAAGGCCCCTTACAAGTGGTGTGGCATATGCTGTACGGGTTCTCCACTCTGAAAGGGAAAGATTTGAAAAGCAACAAGGCTGGACCATCAAGAGAATGGATACCCTTGAACAGAATCCAGTTCATAAAGATGATTATACGCCAGAAGCTTTGGAACCATCCCCAGTACAGGAAGAATACGCCCCTGTCATCTTTGCGCAGGATACCATTTCACATGTGGTTTCGCTGGATATGCTGTCAGGAAAGGAAGACCGTGAGAATGTGTTGCGGGCCAGAGAATCGGGGAAAGGGGTTTTAACAGCTCCTTTCAGGCTAATCAAAACTAATAGACTTGGAGTAATACTAACGTTTGCTGTATACAAGAGTGTTCTATCTTCAAATGCAACACCGAACGAAAGGATTCAAGCAACTGATGGATATCTTGGAGGGGTCTTCGACGTTGAATCACTGGTGGAGAAATTACTGCAACAACTTGCAAGCAAGCAAACTATAATTGTGAATGTCTATGATACCACCAATAGTTCATATCGGATCGGTATGTATGGTTCAAATGTTTCAGTTGACAACTTGCTTCATGTCAGCGCACTTAACTTTGGAGATCCATTTCGGAAGCATGAGATGCAGTGCAGATTCAAACACAAAGCCCCATGGCCATGGTTGGCAATAACTACGTCAATTGGCATACTTGTTATTGCACTCCTTATTGGGCATATATTCCATGCTACGGTAAACCGAATTGCTAAAGTAGAAGATGATTACTATGAGATGGAGGAGCTTAAGAAGCGTGCTGAGGCAGCTGATGTTGCAAAATCTCAGTTTCTTGCCACAGTTTCCCATGAGATCAGAACACCCATGAATGGTGTTCTAGGAATGCTTCATATGCTGATGGACACAGATTTAGATGTCACTCAACTAGAATATGTCAGAACTGCACAGGCAAGTGGGAAAGCACTTGTTTCACTTATAAATGAGGTGTTGGACCAGGCAAAAATTGAATCTGGCAAGCTGGAGCTGGAGGCAGTGCGCTTTGACTTACGGGCAATTTTGGATGACATATTATCACTCTTCTCCGAGAAATCACAAGAAAAAGGTGTAGAGTTGGCGGTGTTTATTTCCGATCAGGTTCCTGAAATGCTAATAGGTGATCCAGGAAGGTTTCGCCAGATAATAACCAATCTTGTGGGGAACTCAATCAAATTCACAGAGAAAGGACACATCTTTGTCACAGTCAATCTTGTTGAAGAGGTTATGAACTCAATTGAAGTGGAGACGGAATTGTCTCCAAAAAACACCTTGAGTGGGTTACCTGTTGTGGACAGACGTCGAAGCTGGGAAAAGTTTAGGACTTTCAGTCAAGATAGGTGTCTTGGTCCTTTCTCGCCTTCCTCCTCTGATCGCATCGACTTAATTGTTTCTGTTGAAGATACAGGAGTTGGTATTCCCCTAGAAGCCCAACCTCGAGTATTCACTCCTTTTATGCAGGTCGGTCCTTCCATTTCTAGAAATTATGGGGGCACAGGGATAGGATTAAGTATTAGCAAGTGCTTGGTTGGCCTCATGAGTGGGGAAATAGGATTTGCTAGCATACCAAAAATTGGCTCAACTTTCACATTCACTGCTGTTTTCTCCAATGGGTGCTCTGGTTCAAAGGATTATAGTCAACAGATGAATAGACAGTCCAATACAGTATCACCAGAATTTCAAGGCATGAAGGCCTTGATTGTGGACCACAGACCTGTAAGGGCCAAAGTATCAAGATATCATATCCAAAGGCTTGGAATGCATGTCGAAGTAATTCTGGACCTGAATCAAGGATTGTCAATATTGAGTAATGGAAATTCAGTTATCAATGGGGTCTTCATAGAGTTGGAGGCATGGGAAAAGGATTCGAGTATTTCTGCTCACTTTGTCCATAACTTGAAGAGAACAGATCATGAGACTCCAAAGCTTTTTCTTCTAGCTAATTCAATTGGATCATCTAGATCAACTTCTGCGATATCAGGTGTTCATAACCCCATTGTAATTTTGAAGCCTCTACGAGCAAGTATGCTTGCTGCCTCACTTCAACAAGCTATGGGTTTTAAGAACAAAGGAACTCCTCGAAATGGGGAGGTTCCCGGTTTGTCACTCTGCCATCTTCTACTTGGTAGGAAGATTCTTATTGTAGATGACAACAATGTCAATCTCAAAGTAGCAGAGGGTGCTCTGAAGAAGTATGGAGCTGACGTTGTTCGCGCTGACTGTGGGGAGAAAGCTATATCTTTGCTGACACCTCCCCATCATTTTGATGCCTGTTTCATGGATATCCAAATGCCAGAGATGGATGGGTTTGAAGCTACAAAGAGAATCAGGGAAATGGAACGCAGTGTCAACCAGAGGATTCAACGAGGAGAAGCATCTCTTGTATCGGCTGAGAATGTATCGAGCTGGCATGTTCCCATTCTTGCGATGACGGCAGATGTGATCCAAGCTACACATGAGCAATGTCTGAAGTGTGGGATGGATGGATATGTATCTAAACCATTTGAAGCTGAGCAGCTTTATCGCGAAGTCTCTCAGTTTTTCCAACCATCTTGA 3084 0.4274 MSLLHVFGYGLKLGGRLFWLLWCFTVSLIYMNWFVSGGIMETRTSLLSNGDKMWLKWWEKKVLHNYYLYLGSKKVRRALWRKLLVAWVIGWTMGSICIFLYLSSQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHGKSPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSERERFEKQQGWTIKRMDTLEQNPVHKDDYTPEALEPSPVQEEYAPVIFAQDTISHVVSLDMLSGKEDRENVLRARESGKGVLTAPFRLIKTNRLGVILTFAVYKSVLSSNATPNERIQATDGYLGGVFDVESLVEKLLQQLASKQTIIVNVYDTTNSSYRIGMYGSNVSVDNLLHVSALNFGDPFRKHEMQCRFKHKAPWPWLAITTSIGILVIALLIGHIFHATVNRIAKVEDDYYEMEELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQLEYVRTAQASGKALVSLINEVLDQAKIESGKLELEAVRFDLRAILDDILSLFSEKSQEKGVELAVFISDQVPEMLIGDPGRFRQIITNLVGNSIKFTEKGHIFVTVNLVEEVMNSIEVETELSPKNTLSGLPVVDRRRSWEKFRTFSQDRCLGPFSPSSSDRIDLIVSVEDTGVGIPLEAQPRVFTPFMQVGPSISRNYGGTGIGLSISKCLVGLMSGEIGFASIPKIGSTFTFTAVFSNGCSGSKDYSQQMNRQSNTVSPEFQGMKALIVDHRPVRAKVSRYHIQRLGMHVEVILDLNQGLSILSNGNSVINGVFIELEAWEKDSSISAHFVHNLKRTDHETPKLFLLANSIGSSRSTSAISGVHNPIVILKPLRASMLAASLQQAMGFKNKGTPRNGEVPGLSLCHLLLGRKILIVDDNNVNLKVAEGALKKYGADVVRADCGEKAISLLTPPHHFDACFMDIQMPEMDGFEATKRIREMERSVNQRIQRGEASLVSAENVSSWHVPILAMTADVIQATHEQCLKCGMDGYVSKPFEAEQLYREVSQFFQPS* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02273 1027 PANTHER TWO-COMPONENT HISTIDINE KINASE 116 1017 - -
Pte1g02273 1027 PRINTS Bacterial sensor protein C-terminal signature 638 652 IPR004358 GO:0016310|GO:0016772
Pte1g02273 1027 PRINTS Bacterial sensor protein C-terminal signature 656 666 IPR004358 GO:0016310|GO:0016772
Pte1g02273 1027 PRINTS Bacterial sensor protein C-terminal signature 673 691 IPR004358 GO:0016310|GO:0016772
Pte1g02273 1027 FunFam Histidine kinase 4 155 384 - -
Pte1g02273 1027 Coils Coil 415 435 - -
Pte1g02273 1027 Gene3D - 883 1026 - -
Pte1g02273 1027 ProSiteProfiles Histidine kinase domain profile. 445 713 IPR005467 -
Pte1g02273 1027 CDD PRTases_typeI 840 915 IPR000836 -
Pte1g02273 1027 Pfam His Kinase A (phospho-acceptor) domain 438 503 IPR003661 GO:0000155|GO:0007165
Pte1g02273 1027 SUPERFAMILY CheY-like 735 862 IPR011006 -
Pte1g02273 1027 ProSiteProfiles CHASE domain profile. 151 377 IPR006189 -
Pte1g02273 1027 Gene3D - 502 713 IPR036890 -
Pte1g02273 1027 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 550 711 IPR003594 -
Pte1g02273 1027 SMART REC_2 886 1020 IPR001789 GO:0000160
Pte1g02273 1027 CDD HisKA 438 499 IPR003661 GO:0000155|GO:0007165
Pte1g02273 1027 SUPERFAMILY CheY-like 885 1023 IPR011006 -
Pte1g02273 1027 ProSiteProfiles Response regulatory domain profile. 887 1024 IPR001789 GO:0000160
Pte1g02273 1027 SMART CHASE_2 151 352 IPR006189 -
Pte1g02273 1027 ProSiteProfiles Response regulatory domain profile. 740 861 IPR001789 GO:0000160
Pte1g02273 1027 CDD REC_hyHK_CKI1_RcsC-like 888 1020 - -
Pte1g02273 1027 CDD HATPase_EvgS-ArcB-TorS-like 555 711 - -
Pte1g02273 1027 Pfam Response regulator receiver domain 888 1019 IPR001789 GO:0000160
Pte1g02273 1027 SMART HisKA_10 438 503 IPR003661 GO:0000155|GO:0007165
Pte1g02273 1027 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 492 708 IPR036890 -
Pte1g02273 1027 Gene3D - 406 501 - -
Pte1g02273 1027 FunFam Histidine kinase 4 410 501 - -
Pte1g02273 1027 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 423 504 IPR036097 GO:0000155|GO:0007165
Pte1g02273 1027 Gene3D CHASE domain 155 384 IPR042240 -
Pte1g02273 1027 Gene3D - 102 154 - -
Pte1g02273 1027 SMART HKATPase_4 550 713 IPR003594 -
Pte1g02273 1027 Pfam CHASE domain 154 344 IPR006189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02273 Pte-Chr1 43506313 43512553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02273 1 1024 Miscellaneous Gene Families AT1G27320 70.554 0.0 1439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pte1g02273 CHASE 7.3e-37 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02273 K14489 - jre:109003197 1602.42