Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02261 ATGAATATTGACTTGAACTCTGAACCACGAAACTTGGATTTTTTATCCAGTTCTCAGAAGTCATCGTCAATCTTAGGGACAACAAAAACTTCTTTCTTTACTGGAAGGAAATTGAAAGTTGACAAATTTACCACAAGATCAGCTGGAGGAAGATCCTTCACAGTGTGCGCTGCTGCTGCTGACCCTGACAGACCTTTGTGGTTCCCTGGCAGCACCCCTCCTGCATGGCTTGATGGAAGCCTACCCGGAGACTTTGGCTTCGATCCTTTGGGTCTTGCATCGGATCCTGAGTCACTGAGATGGAACGTGCAAGCAGAGCTTGTACATTGCAGATGGGCAATGTTGGGAGCTGCAGGCATTTTCATCCCCGAGTTCCTCACAAAGATCGGTATTCTAAACACTCCTTCATGGTACACTACTGGTGAACAGGAATACTTTACAGACACGACTACCCTCTTCATAATCGAGCTAATTTTGATTGGGTGGGCTGAGGGTAGAAGATGGGCAGACATAATCAAGCCTGGTTCTGTGAACACAGATCCTATCTTCCCCAACAACAAGCTTACAGGAACTGACGTTGGATACCCTGGTGGACTTTGGTTTGACCCATTTGGATGGGGTAGTGGTTCCCCTGAGAAAATTAAGGAGTTAAGGACAAAGGAGATCAAGAATGGGAGGTTGGCCATGTTGGCTGTGATGGGTGCATGGTTCCAACATACATACACTGGAACAGGTCCTATTGATAACCTCTTCGCTCATCTTGCTGATCCTGGCCATGCCACAATATTTGCTGCTTTCACACCCAAGTGA 810 0.4667 MNIDLNSEPRNLDFLSSSQKSSSILGTTKTSFFTGRKLKVDKFTTRSAGGRSFTVCAAAADPDRPLWFPGSTPPAWLDGSLPGDFGFDPLGLASDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTTGEQEYFTDTTTLFIIELILIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPFGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHTYTGTGPIDNLFAHLADPGHATIFAAFTPK* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02261 269 FunFam Chlorophyll a-b binding protein, chloroplastic 74 259 - -
Pte1g02261 269 Gene3D Chlorophyll a/b binding protein domain 74 259 - -
Pte1g02261 269 Pfam Chlorophyll A-B binding protein 73 239 IPR022796 -
Pte1g02261 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 23 267 IPR001344 GO:0009765|GO:0016020
Pte1g02261 269 SUPERFAMILY Chlorophyll a-b binding protein 57 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02261 Pte-Chr1 43434717 43437611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02261 54 270 Chloroplast and Mitochondria Gene Families AT3G61470 91.705 1.23e-150 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02261 K08908 - qsa:O6P43_030599 467.618