Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02247 ATGCCGAGAGTAATGCAGAGGTATTGTAAATTTCTCATGTCTGGGTTTGGTTGCAATAATTGGAAACTTCCATTTGATGGGATGCCTTTTACTTTTACTATTCGTGATCATAATTCTATCGGCAGTAATAGCAATCCTTTTGATGTTCCATTTGACCAGGTGAAGGGTTTGGATGTGGATGCTCTCTTCATATCCCACATCCAGGTTAACCAGGCACAGAAACAAAGGCGCCGAACCTATCGTGCCCATGGGAGAATTAACCGTATGTTTTATTCTGTTGTTCGTGGGTTAAGTGTTTTTGACTTTGTTCACTAA 315 0.4063 MPRVMQRYCKFLMSGFGCNNWKLPFDGMPFTFTIRDHNSIGSNSNPFDVPFDQVKGLDVDALFISHIQVNQAQKQRRRTYRAHGRINRMFYSVVRGLSVFDFVH* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02247 104 Gene3D Ribosomal protein L22/L17 39 94 IPR036394 GO:0003735|GO:0005840|GO:0006412
Pte1g02247 104 PANTHER 60S RIBOSOMAL PROTEIN L17 53 90 IPR005721 GO:0003735|GO:0006412|GO:0015934
Pte1g02247 104 SUPERFAMILY Ribosomal protein L22 54 92 IPR036394 GO:0003735|GO:0005840|GO:0006412
Pte1g02247 104 Pfam Ribosomal protein L22p/L17e 53 92 IPR001063 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02247 Pte-Chr1 43326894 43328823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02247 53 87 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 94.286 1.85e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02247 K02880 - dct:110112288 72.7886