LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g02243	ATGAGCACAACGAACTTTTTTTTTCAATTCCTTCAGTTCTCTCTGTTTCTACTACTCATATTTCACTTCCCCATTGAACCAAATCAAAGATTCGTTTACTCTCTCTCCTCTGATGGACTTTCTCTTCTCGCTCTAAAATCTGCTGTCCATGATATTTCCGCTTTTGCTGACTGGAACGAAAATGACGGAACTCCCTGTCATTGGACGGGAATTTCCTGCACGAACATCACAGGATTCCCCGAACCCCGTGTGGTCGGTGTCGCTGTCTCTGGTAAGAACCTACGGGGCTATATTCCATCGGAATTGGGAAGTTTGGTGTATCTCCGGCGTCTTAACCTCCATAGCAACAACTTCTATGGGTCCATACCTGTTCAGCTATTCAATGCTACATCTCTTCGTAGCATATTTCTCTATGGTAACAATCTCTCCGGTCTTCTTCCTCCTTCTATCTGCAACATTCCAAGGCTTCAAAACCTCGATCTTTCTGACAATTCACTATCGGGTCCATTAACGGAGGGCCTGCAGAATTGTAAGCAGTTTCAGAGACTCATACTTGCCCGGAACAAGTTTTCTGGAAACCTCCCATCAGGTGTTTGGTCTGAATTAGATAACTTGGTCCAACTGGACCTTTCGTCGAACGAGTTTACTGGACCCATTCCTGAGGGCATTGGGGAGCTGAATTATCTCTCCGGTACGCTCAACCTTTCGTTCAATCATTTTTCCGGCGAAATTCCCAAAATGCTTGGAAATCTACCGGTGACCGTGAGTTTTGATCTCCGCAGCAACAACCTTAGCGGCAAGATACCACAAACGGGCACATTTACAAACCAGGGTCCGACTGCGTTTCTCAACAATCCTAGACTGTGCGGGTTTCCTCTCCAGAAAGCTTGTCATGGGTCAGAATCAATGGATCCTCCAAATTCAGCTCCAGGATCAGGAAACAATTACGCGAAAGGCTTAAGTACCGGTTTGATCATATTGATCTCAGTGGCCGATGCAGCCGGCGTTGCACTCATTGGTCTTGTAATGGTGTATATCTACTGGAAGAAGAAAGACAATTCGAACGGCTGTAGCTGCACAGGGAAAAGGAAATTCGGGGACAATGAGAAACCACGTTTTTGTTATTTTCCATGTATTAAAGGATTTAAAAACGATGACTCTGAATTGGAAGATGGTGAAAAAGCAGAGAGAGGCAAAGGGGAAGGAGACTTGGTGGCCATTGATAAAAATTTCGACTTTGAACTTGATGAGCTTCTGCGAGCTTCGGCTTATGTGTTGGGGAAGAGTGGCTTTGGCATTGTATATAAGGTGGTGTTAGGAAATGGAGTGCCTGTAGCCGTGAGAAGATTGGGGGAAGGTGGTGAACAGAGGTACAAGGAGTTTGTGTCTGAAGTTCAAGCCATTGGGAAAGTCAAGCATCCAAACATGGTGAGTTTAAGAGCTTATTATTGGGCTTCTGATGAGAAGCTTCTTATTAGTGATTTCATCTCAAATGGCAATTTGGCCTACGCTCTTCGAGGAAGAGGTGGCCAACCCTCTCCCAACCTCTCATGGTCAATCAGACTCAAAATTGCAAAAGGAACAGCCAGGGGTTTGGCCTATCTTCACGAGTGCAGCCCAAGAAAGTTCGTCCATGGTGACATCAAACCATCTAATATTCTCCTTGACAGTGATTTTCAACCGCACATATCAGATTTCGGCCTTAGCAGATTGATCACAATAACAGGAAACAACCCATCATCTTCAGGTGGTTTTATGGGAGGAGCTCTACCTTACATAAAGTCATCCTCACAGTCAGAGACAACAAACTTTTATCGAGCCCCTGAAGCTCGTGTACCTGGCAGCAGACCCACCCAAAATTGCGACGTTTATTCATTTGGAGTTGTACTGCTTGAAATACTCACTGGAAAATCGCCGGAACTGTCTCCCACAACATCAACTTCTGTGGAATTTCCAGACTTAGTGAAGTGGGTGAAGAAAGGGTTTGAAGAAGAGAGCCCTTTGTCAGACATGGTGGATCCTTCATTGCTCCAAGAAGTGCGTGCCAAGAAAGAGGTATTAGCTGCATTTCACGTAGCATTGTCATGCACTGAGGCAGACCCCGAGATTCGACCTAGGATGAAATCTGTGTCTGAAGATCTTGAAAGAATTGGAACTTGA	2160	0.4514	MSTTNFFFQFLQFSLFLLLIFHFPIEPNQRFVYSLSSDGLSLLALKSAVHDISAFADWNENDGTPCHWTGISCTNITGFPEPRVVGVAVSGKNLRGYIPSELGSLVYLRRLNLHSNNFYGSIPVQLFNATSLRSIFLYGNNLSGLLPPSICNIPRLQNLDLSDNSLSGPLTEGLQNCKQFQRLILARNKFSGNLPSGVWSELDNLVQLDLSSNEFTGPIPEGIGELNYLSGTLNLSFNHFSGEIPKMLGNLPVTVSFDLRSNNLSGKIPQTGTFTNQGPTAFLNNPRLCGFPLQKACHGSESMDPPNSAPGSGNNYAKGLSTGLIILISVADAAGVALIGLVMVYIYWKKKDNSNGCSCTGKRKFGDNEKPRFCYFPCIKGFKNDDSELEDGEKAERGKGEGDLVAIDKNFDFELDELLRASAYVLGKSGFGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFVSEVQAIGKVKHPNMVSLRAYYWASDEKLLISDFISNGNLAYALRGRGGQPSPNLSWSIRLKIAKGTARGLAYLHECSPRKFVHGDIKPSNILLDSDFQPHISDFGLSRLITITGNNPSSSGGFMGGALPYIKSSSQSETTNFYRAPEARVPGSRPTQNCDVYSFGVVLLEILTGKSPELSPTTSTSVEFPDLVKWVKKGFEEESPLSDMVDPSLLQEVRAKKEVLAAFHVALSCTEADPEIRPRMKSVSEDLERIGT*	720

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g02243	719	FunFam	Os07g0541700 protein	505	583	-	-
	Pte1g02243	719	FunFam	Leucine-rich repeat receptor-like protein kinase	204	299	-	-
	Pte1g02243	719	Gene3D	Ribonuclease Inhibitor	198	298	IPR032675	-
	Pte1g02243	719	FunFam	Leucine-rich repeat receptor-like protein kinase	403	495	-	-
	Pte1g02243	719	SUPERFAMILY	L domain-like	51	294	-	-
	Pte1g02243	719	SMART	serkin_6	424	717	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g02243	719	Gene3D	Transferase(Phosphotransferase) domain 1	496	719	-	-
	Pte1g02243	719	SUPERFAMILY	Protein kinase-like (PK-like)	425	715	IPR011009	-
	Pte1g02243	719	FunFam	Leucine-rich repeat receptor-like protein kinase	35	196	-	-
	Pte1g02243	719	ProSiteProfiles	Protein kinase domain profile.	420	717	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g02243	719	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	163	717	IPR046959	-
	Pte1g02243	719	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	543	555	IPR008271	GO:0004672\|GO:0006468
	Pte1g02243	719	Gene3D	Ribonuclease Inhibitor	36	197	IPR032675	-
	Pte1g02243	719	Gene3D	Phosphorylase Kinase; domain 1	403	495	-	-
	Pte1g02243	719	CDD	STKc_IRAK	426	717	-	-
	Pte1g02243	719	Pfam	Protein kinase domain	425	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g02243	719	Pfam	Leucine rich repeat	108	166	IPR001611	GO:0005515
	Pte1g02243	719	Pfam	Leucine rich repeat N-terminal domain	36	73	IPR013210	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g02243	Pte-Chr1	43279379	43282786	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g02243	34	717	Receptor kinase-like Gene Family	AT1G67510	69.943	0.0	963

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Pte1g02243		Pkinase	1e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g02243	-		-	qsa:O6P43_023877	1137.48