Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02236 ATGGACACCTGGTGGGGTAGTGGTCCAGAAGCTGACCAACAAGAGAGTGAAAATTTTGTTCCTACACGTAATATATCATCATCCAGATGGGCAGCTGGCAGCAGTTCACCTGGTGATGAAGGTGAAATTATAGATGATGAGGATGTGCCAAAAAGGAGGAAGAAAATGTCTATTACTGAATCATTGGAATCTAGAGGAAGGAGTACATTTTTGAGTCCAGAGACTGTGGATTCCGAGAGAGAGGGATATGTGGGAGCCAAATCATTTGATTCGGATGAGCTAGGTAAACATACTAGGTCATCGAGTAGAGATGAATGCCCCAGTAACGATTCAGAGAGGGATGACTACATGGAAATCGATACTGACCGTGATAAGAATGGCAGCAGTCCTCCTTTGGATACAGATCCTGAGGATGATTGTGATGATGGTCATGCAACTCCTGAACCCCCAGCTCCTCCTCTAAGGTCTGTTAACATGCTGCAGGGCTGTAGGAGTGTCGATGAGTTTGAGAGACTTAATAAGATAGACGAGGGTACTTATGGTGTTGTATATAGAGCTAGAGATAAGAAAACTGGTGAGATCGTAGCATTGAAGAAGGTAAAGATGGAAAAGGAGAAGGAGGGGTTTCCTCTCACTTCTCTTCGGGAAATAAATATTCTCCTTTCTTTTCATCACCCTTCTATTGTGGATGTAAAGGAAGTTGTGGTAGGGAGTAGTCTTGACAGTATTTTTATGGTGATGGAATACATGGAACATGATCTCAAAGGACTGATGGAAACAATGAAACAGCCATTTAGTCAGAGTGAAGTGAAATGCCTGATGCTTCAGCTTTTAGAAGGTATCAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCGAATCTGCTTTTAAATAATAGGGGTGAGTTGAAAATTTGTGACTTTGGTTTGGCCCGTCAGTATGGGAGTCCATTAAAAACGTACACACACTTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGAACCAAGAAGTATTCAACAGCCATTGACATGTGGTCTTTGGGTTGTATTATGGCCGAGTTATTGTCCAAGGAGCCTTTGTTCAATGGGAAGACTGAATTTGATCAACTTGATAAGATCTTTAGGATTTTGGGAACACCAAATGAAACAATTTGGCCTGGCTTCTCCAAGCTTCCTGGTGTCAAGGTCAACTTTGTCAAACACCAGTATAACCTTCTCCGTAAGAAGTTCCCAGCCACATCTTTCACTGGATCACCAGTCCTCTCTGATGCTGGATTTGACTTGCTGAACAAACTTCTCACATATGACCCTGAGAAGCGGATCACAGCTGAAGCTGCCCTTAATCATGATTGGTTTCGTGAAGTTCCTCTTCCAAAATCTAAAGAATTTATGCCCACTTTTCCTGCTCAACATGCTCATGACAGGCGCATGAGGAGAGTGTTGAAGAGTCCAGATCCTTTAGAGGAGCAGCGCAGAAAGGAGTTGCAGCAAGGAGAATCAGGGGCTGGGGGTCTGTTTGGCTGA 1548 0.4354 MDTWWGSGPEADQQESENFVPTRNISSSRWAAGSSSPGDEGEIIDDEDVPKRRKKMSITESLESRGRSTFLSPETVDSEREGYVGAKSFDSDELGKHTRSSSRDECPSNDSERDDYMEIDTDRDKNGSSPPLDTDPEDDCDDGHATPEPPAPPLRSVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKTYTHLVVTLWYRAPELLLGTKKYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNKLLTYDPEKRITAEAALNHDWFREVPLPKSKEFMPTFPAQHAHDRRMRRVLKSPDPLEEQRRKELQQGESGAGGLFG* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02236 515 SUPERFAMILY Protein kinase-like (PK-like) 161 466 IPR011009 -
Pte1g02236 515 FunFam cyclin-dependent kinase G-2 isoform X1 154 251 - -
Pte1g02236 515 MobiDBLite consensus disorder prediction 478 515 - -
Pte1g02236 515 FunFam Cyclin-dependent kinase G-2 252 491 - -
Pte1g02236 515 ProSiteProfiles Protein kinase domain profile. 169 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02236 515 Pfam Protein kinase domain 169 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02236 515 MobiDBLite consensus disorder prediction 45 61 - -
Pte1g02236 515 PANTHER CELL DIVISION PROTEIN KINASE 167 466 - -
Pte1g02236 515 Gene3D Phosphorylase Kinase; domain 1 155 251 - -
Pte1g02236 515 MobiDBLite consensus disorder prediction 1 157 - -
Pte1g02236 515 CDD STKc_CDC2L1 163 460 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pte1g02236 515 SMART serkin_6 169 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02236 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Pte1g02236 515 MobiDBLite consensus disorder prediction 80 132 - -
Pte1g02236 515 Gene3D Transferase(Phosphotransferase) domain 1 252 491 - -
Pte1g02236 515 MobiDBLite consensus disorder prediction 9 34 - -
Pte1g02236 515 MobiDBLite consensus disorder prediction 478 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02236 Pte-Chr1 43231959 43234536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02236 162 505 Core Cell Cycle Gene Families AT5G10270 45.125 7.44e-97 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pte1g02236 Pkinase 5.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02236 K08818 - pvy:116126486 842.417