Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02198 ATGGCAACCGATTCTTTACCAATGAACTCGCAAAAGAGTGGCGGCATTCTCACCACGAGGTTACCGATTTCGTCTTCGTGCATACCTTTCAACGTTCAGACCACCGCCGCGACAGAGCCATCCTCGTTGAAGCGCAAGAGACCACCAAAGATAGAGATTCCAAACGTTCTCCGAGAGATTCTGGTCGAGAAGCACACAGATACGGATTTCACTGCAAAGAATGAATCTTTATGCTTCACTGGATGTGGGGTGGGAGTTGCCTCTGTTAAGGGCAAGAAGAAAGTCATGGAGGACGCTCACATGATTGTTCCTTCTATAGGAGGCAATTCAAAGAAGGGTTTCTTTGGTGTCTATGATGGACATGGTGGAACAAAGGCAGCGGAGTTCGTCGCGGATAACTTGCATACGAAGATTCTCAAAATGGTGGAGGATTGTAAAGGGCCTATGGCAAAGGAGGAAGCTATAAAAGCTGGGTATTTGGAAACAGATGAAGAATTCTTAAAGCAGGGTGTAGGCAGTGGTGCATGTTGTGTTACTGCATTGATTGAACGGAATGAGATTCTTATTTCAAACCTGGGAGATTGTAGGGCTGTTCTCTGTAGAGGTGGAGTTGCCAAAGCTCTAACAAAAGATCATAGGGTGGAACAAGAAGATGAACGAAAAAGAATAGAGGAAAAGGGAGGATACGTGGAGATTCACAGGGGAGCATGGAGAATCCATGGAATCCTCTCTGTGTCCAGAAGCATCGGTGATGCTCATCTAAAGGATTGGGTGATGGCTGAGCCTGATACAAAGATAATACAACTGACTTCAGACATGGAATACCTCATCTTAGCTTCTGATGGATTGTGGGAAAGGGTTGGTAATCAAGAAGCAGTTGATACAATCTTGAGAATTTGTCACAAAGATAAGTTGGGAGCTTCAGGTCTTGAGAAAGAAACTGGTAACAATTGTGGCTGTGTGCACATTAGTCCTTCATCGAAATTGCGGAGAATCTCATTGGTCAAGCAACATAGAGGAGCTACATGCTTAAACAAAATATCTAATGGCTGTAACGAAAATGAAGATGAATTTCCTGGTGAAAATGAAAGTGCTCCATCAAAGTTTCGGCGAATATCAATTGTCAAGCGAGTAAACATGAGAATTGAATCTCCATCTAAAGAGAACAGTTCCTGCAGTAGGAAAACATCCAATTATGGACTAAGTGCCGCTTGCAAGGAACTTGTTAATCTTGCAGTGAGTAGGGGTAGTCTGGATGACATCACTGTAATGGCAATTGATCTAAATAACTTCAGATGCAATAACTGA 1308 0.4327 MATDSLPMNSQKSGGILTTRLPISSSCIPFNVQTTAATEPSSLKRKRPPKIEIPNVLREILVEKHTDTDFTAKNESLCFTGCGVGVASVKGKKKVMEDAHMIVPSIGGNSKKGFFGVYDGHGGTKAAEFVADNLHTKILKMVEDCKGPMAKEEAIKAGYLETDEEFLKQGVGSGACCVTALIERNEILISNLGDCRAVLCRGGVAKALTKDHRVEQEDERKRIEEKGGYVEIHRGAWRIHGILSVSRSIGDAHLKDWVMAEPDTKIIQLTSDMEYLILASDGLWERVGNQEAVDTILRICHKDKLGASGLEKETGNNCGCVHISPSSKLRRISLVKQHRGATCLNKISNGCNENEDEFPGENESAPSKFRRISIVKRVNMRIESPSKENSSCSRKTSNYGLSAACKELVNLAVSRGSLDDITVMAIDLNNFRCNN* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02198 435 Pfam Protein phosphatase 2C 84 302 IPR001932 -
Pte1g02198 435 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169
Pte1g02198 435 SMART PP2C_4 71 426 IPR001932 -
Pte1g02198 435 ProSiteProfiles PPM-type phosphatase domain profile. 83 428 IPR001932 -
Pte1g02198 435 CDD PP2Cc 83 296 IPR001932 -
Pte1g02198 435 SUPERFAMILY PP2C-like 79 430 IPR036457 -
Pte1g02198 435 Gene3D - 79 435 IPR036457 -
Pte1g02198 435 PANTHER PROTEIN PHOSPHATASE 2C 52 426 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02198 Pte-Chr1 42993202 42996243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02198 16 432 PP2C-type Phosphatase Gene Family AT1G67820 51.896 1.20e-136 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02198 - K17506 qsa:O6P43_029371 547.74