Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g02195 | ATGGGTCTCTCACACTTTCCTTCTGCATCTGAAGGAGTACTCCTTGTACTTGTGATGAACACAGTTCTGTCAGTATCTCTGTTAAAGAACATGGTAAGATCTATGCTTTCAGCGATGGGCTCCACGGAAAGTGCGTCCAATGTAGATCAGGAAGATTTAGATAATTACACTGAGGATTTTTCAAGAGAGAGGAGAATCTCCATAACTCAATTCAAATCCTTGTGCAACACCAGGAGTGCTGCAGAGGCCATAAGCGACAGTAGTAGAAGTACAACTACTGCTGGTACCGGTGGCTGGGTTAATACAGTGGAGTGTTGCGTGTGTCTTTGTCTGTTTGAAGCGGATGAGGAGGTGAGTGAATTATCATGCAAGCATTTCTTCCACAAAGGTTGCCTAGAGAAGTGGTTCCAGAAAAAGCACAGCACCTGTCCTCTCTGCCGCTCGATTGAGTAG | 453 | 0.4525 | MGLSHFPSASEGVLLVLVMNTVLSVSLLKNMVRSMLSAMGSTESASNVDQEDLDNYTEDFSRERRISITQFKSLCNTRSAAEAISDSSRSTTTAGTGGWVNTVECCVCLCLFEADEEVSELSCKHFFHKGCLEKWFQKKHSTCPLCRSIE* | 151 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g02195 | 150 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 81 | 149 | IPR013083 | - | |
Pte1g02195 | 150 | Pfam | Ring finger domain | 104 | 147 | IPR001841 | - | |
Pte1g02195 | 150 | CDD | RING-H2_PA-TM-RING | 104 | 147 | - | - | |
Pte1g02195 | 150 | ProSiteProfiles | Zinc finger RING-type profile. | 105 | 147 | IPR001841 | - | |
Pte1g02195 | 150 | SMART | ring_2 | 105 | 146 | IPR001841 | - | |
Pte1g02195 | 150 | SMART | ringv_2 | 104 | 147 | IPR011016 | GO:0008270 | |
Pte1g02195 | 150 | SUPERFAMILY | RING/U-box | 104 | 148 | - | - | |
Pte1g02195 | 150 | PANTHER | - | 1 | 148 | IPR044249 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g02195 | Pte-Chr1 | 42980200 | 42984476 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g02195 | 1 | 148 | C3H Transcription Factor Family | AT2G04240 | 33.929 | 4.60e-24 | 90.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g02195 | K16285 | - | tcc:18609579 | 199.134 |