Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02181 ATGGCCATTACAACTGGTGGAAGTACATCCATTGCTCAATGGGGACTACGTCCTCAATATTTTCTGAGATCTGCTTCTACGTGCAGGATCACAGCTCCCAGTTGCAGCCTTCTCACCTGTAGAGTTACTAGCAGGGTGAATTTTATGGCAACAACAAGTTCAGGCTTGCTCTATCAGGATTCCGTGAATGCAATATTTGGTTCAGTTTCATCTCAGACTTCACATCATCGAAGGGGATCAAGGTTCATAGTCAGAGCAAATAGTGACTACTATTCTATCCTTGGGGTTTCCAAAAATTCTAGCAAATCTGAGATCAAGAGTGCTTATCGGAAGCTTGCAAGGAGCTATCACCCAGATGTGAACAAAGAACCTGGGGCAGAACAGAAATTTAAGGAAATCAGCAATGCGTACGAGGTCTTGTCAGATGATGAGAAGCGATCCATCTATGATAGATATGGGGAGGCTGGGCTTAAAGGTTCTGGAATGGGTATGGGGGATTTCAGCAATCCATTTGATCTGTTTGAGACCCTATTTGAGGGCTTCGGTGGTGCTGGTATGGGGAGCAGAGGATCTTGGAATGGAGCATTAGATGGAGAAGATGAGTACTACAGTCTTGTCTTGAACTTTAAGGAAGCAGTTTTTGGAGTGGAAAAAGAGATCGAAATAAGCCGACTAGAGAACTGTAGCACTTGTAATGGCTCAGGGGCAAAGCCTGGAACTCAGCCTTCTAAATGCAGCACCTGTGGTGGCCAAGGCCGTGTAGTCTCTTCCACCAGGACTCCATTAGGCGTCTTCCAGCAGTCAATGACATGCTCTACATGCCGTGGGACTGGAGAAATTTCCACACCTTGCACCACGTGTTCTGGAGATGGTAGAGTGAGGAGGACAAAGCGGATAAGTCTGAAAGTTCCAGCTGGAGTAGACTCCGGTAGCCGTCTAAGGGTTCGAAATGAAGGGAATACTGGAAGACGGGGCGGTTCTCCTGGTGACCTCTTTGTGGTTATTGAAGTTATCCCTGATCCTGTCTTAAAACGTGATGATACTAACATATTATACACTTGTAAGGTGTCGTACATTGATGCCATCCTGGGGACTACGACTAAGGTCCCAACTGTGGATGGCATGGTTGATTTGAAGATCCCATCAGGGACTCAGCCTAACACTACGCTAGTTATGGCAAGGAAAGGCGTTCCCCTACTGAACAAAAGCAACATGAGGGGCGATCAGTTGGTAAGAGTGCAAGTTGAAATCCCCAAAAGATTGAGCAGTGAAGAGAGGAAACTTGTTGAGGAACTTGCAGATCTAAGTAAAGGCAAGACTGCTACCGCAAGAAGATGA 1338 0.4626 MAITTGGSTSIAQWGLRPQYFLRSASTCRITAPSCSLLTCRVTSRVNFMATTSSGLLYQDSVNAIFGSVSSQTSHHRRGSRFIVRANSDYYSILGVSKNSSKSEIKSAYRKLARSYHPDVNKEPGAEQKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGFGGAGMGSRGSWNGALDGEDEYYSLVLNFKEAVFGVEKEIEISRLENCSTCNGSGAKPGTQPSKCSTCGGQGRVVSSTRTPLGVFQQSMTCSTCRGTGEISTPCTTCSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNTGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTTKVPTVDGMVDLKIPSGTQPNTTLVMARKGVPLLNKSNMRGDQLVRVQVEIPKRLSSEERKLVEELADLSKGKTATARR* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02181 445 CDD DnaJ 89 142 IPR001623 -
Pte1g02181 445 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 57 442 - -
Pte1g02181 445 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 215 294 IPR036410 -
Pte1g02181 445 Gene3D - 198 333 - -
Pte1g02181 445 Gene3D DnaJ domain 86 190 IPR036869 -
Pte1g02181 445 FunFam Molecular chaperone DnaJ 220 296 - -
Pte1g02181 445 NCBIfam molecular chaperone DnaJ 89 434 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte1g02181 445 ProSiteProfiles Zinc finger CR-type profile. 215 296 IPR001305 GO:0031072|GO:0051082
Pte1g02181 445 SUPERFAMILY HSP40/DnaJ peptide-binding domain 196 350 IPR008971 GO:0006457|GO:0051082
Pte1g02181 445 Pfam DnaJ domain 89 150 IPR001623 -
Pte1g02181 445 Gene3D - 338 445 - -
Pte1g02181 445 SUPERFAMILY HSP40/DnaJ peptide-binding domain 343 429 IPR008971 GO:0006457|GO:0051082
Pte1g02181 445 SMART dnaj_3 88 145 IPR001623 -
Pte1g02181 445 Pfam DnaJ central domain 228 291 IPR001305 GO:0031072|GO:0051082
Pte1g02181 445 SUPERFAMILY Chaperone J-domain 86 187 IPR036869 -
Pte1g02181 445 CDD DnaJ_C 199 421 - -
Pte1g02181 445 ProSiteProfiles dnaJ domain profile. 89 153 IPR001623 -
Pte1g02181 445 FunFam Chaperone protein dnaJ A6 chloroplastic 86 190 - -
Pte1g02181 445 Pfam DnaJ C terminal domain 203 418 IPR002939 -
Pte1g02181 445 FunFam Chaperone protein dnaJ 1, mitochondrial 338 445 - -
Pte1g02181 445 Gene3D - 228 291 - -
Pte1g02181 445 FunFam Putative Mitochondrial DnaJ chaperone 284 333 - -
Pte1g02181 445 PRINTS DnaJ domain signature 125 145 IPR001623 -
Pte1g02181 445 PRINTS DnaJ domain signature 145 164 IPR001623 -
Pte1g02181 445 PRINTS DnaJ domain signature 91 109 IPR001623 -
Pte1g02181 445 PRINTS DnaJ domain signature 109 124 IPR001623 -
Pte1g02181 445 CDD DnaJ_zf 228 291 IPR001305 GO:0031072|GO:0051082
Pte1g02181 445 ProSitePatterns Nt-dnaJ domain signature. 130 149 IPR018253 -
Pte1g02181 445 Hamap Chaperone protein DnaJ [dnaJ]. 86 441 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02181 Pte-Chr1 42888217 42893280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02181 90 152 C2H2 Transcription Factor Family AT1G74250 44.928 8.27e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02181 K03686 - qsa:O6P43_023185 715.687