Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02171 ATGAAAACACTTGAACCTTTTATGAAGAGTGCTTCATCTACCTCTTCCTTCATGTCCTCCTCTCCTTCCTATCCTTCGTTTACATACTCTTCATTTTCAACCCCTCAGCCAGACTTAAATCATGACATATGCTCATCATCGAGAACCCACATGTTTTCTCTTGGGGACTCGAACTATGACCAATTAAGTCTTGGGCATCCAAGTATGCTAGGGCTTAATCAACTTACCCCACTTCAAATTCTGCAGATTCAAGCTCAGATTAAGATACGACAACAGCAGAAAGCAAATTCGACTACCATGGCAAAATATCAGGAGCAAAAACAATGTAGCATGAATCTTCTCCGCCGGAGGTCTATCCCTATGAAAAATGTTGGTACTCAGATTCCAGGAGCAAAAACAAAGCTTTACCGTGGAGTGAGACAGCGCCATTGGGGCAAATGGGTAGCCGAGATTAGGCTCCCCAAGAACCGAACCCGTCTCTGGCTTGGGACTTTTGACACAGCCGAGGCGGCGGCTTTGGCTTATGACAAAGCGGCGTATAAGTTAAGGGGAGATTTCGCTACGTTGAATTTCCCTCATCTGCGGCACGAGGGAGCTCATGTCTTTGGTGAGTTCGGTGACTACAAGCCCCTTCACTCCTCAGTGGATGCGAAGCTCCAAGCAATTTGTCAAAACTTGGCTATTCCGCAGAAGCAGGGGAAGACAGGCAAGCCATCTTCTTCTTTCGTTGACATCAAACCAGTAACATCGCCTCCTTCGCAGGGAAATAAGATTGTCTTTGATGGACTCAGCTTCCAAAGCGTGTACGAATCTCCAGAACCGGTGGATTATATGGTCGAGAAGTTATCATCTTCGCCCGATGTTTCCAATGAGTCTGCAGTTGGTTCTTCTTCCCCTGAATCCGGTTTGACTTTGCTGGACTTCTCGAAGTCTGAATGGGATTTAACTGAGATTTTTTCGCTTGAGAAATATCCATCGGCGGAAATTGATTGGGCAGCCATCTGA 1005 0.4617 MKTLEPFMKSASSTSSFMSSSPSYPSFTYSSFSTPQPDLNHDICSSSRTHMFSLGDSNYDQLSLGHPSMLGLNQLTPLQILQIQAQIKIRQQQKANSTTMAKYQEQKQCSMNLLRRRSIPMKNVGTQIPGAKTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEAAALAYDKAAYKLRGDFATLNFPHLRHEGAHVFGEFGDYKPLHSSVDAKLQAICQNLAIPQKQGKTGKPSSSFVDIKPVTSPPSQGNKIVFDGLSFQSVYESPEPVDYMVEKLSSSPDVSNESAVGSSSPESGLTLLDFSKSEWDLTEIFSLEKYPSAEIDWAAI* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02171 334 MobiDBLite consensus disorder prediction 1 21 - -
Pte1g02171 334 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Pte1g02171 334 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Pte1g02171 334 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Pte1g02171 334 ProSiteProfiles AP2/ERF domain profile. 135 192 IPR001471 GO:0003700|GO:0006355
Pte1g02171 334 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 334 - -
Pte1g02171 334 SMART rav1_2 135 198 IPR001471 GO:0003700|GO:0006355
Pte1g02171 334 FunFam Ethylene-responsive transcription factor 2 134 193 - -
Pte1g02171 334 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
Pte1g02171 334 Gene3D AP2/ERF domain 135 193 IPR036955 GO:0003700|GO:0006355
Pte1g02171 334 CDD AP2 134 194 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02171 Pte-Chr1 42733371 42735164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02171 1 334 AP2-EREBP Transcription Factor Family AT1G78080 46.450 1.64e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte1g02171 AP2 5.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02171 K09286 - qsa:O6P43_030451 316.62