Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02169 ATGCTCAATAATCAAAGCTTATTTGAAGATCAGCATGATCAGATATCCACGCAAATGGGTTTCCTTCCTTTCCCACAAAGCTTGATCTTGCCTGCGTTGGGATGCCACCAGGCTTCTCTTAAAGCCTTCACAGCGACGAACCCATGTCTTGGATCAGATGCACATTCTGCCGCAGCTCCAAATCTATGCGAAACCCTATTGGCATCTGCAACTCCCAAGCCAGGAGACATCGGTTGCAGTTTTGAAGGACAACAACTCCTTTCTTTGCAAAGAAACCACTGGGCATGGGGAGATGTGAACGAGTGCTTAGGTAGCAAGAGAAGTACTGGAGGAGATGATCATCATCTGGGGGTGTCTGCAATGAAGATGAAGAAGATGAAGTCGAGGAGGAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTCTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTGGTAAAGAACACACAGCATCCAAGGAGCTACTATCGTTGTACACGAGATAACTGTCGTGTGAAGAAACGGGTGGAGCGTTTAGCTGAAGATCCTAGGATGGTGATAACAACATATGAAGGGAGACATGCACACTCTCCATCAAACGATCTTGAAGATTCGCAGACTCCATCACAGCTTAATGATTTTTTGTTTTAG 678 0.4631 MLNNQSLFEDQHDQISTQMGFLPFPQSLILPALGCHQASLKAFTATNPCLGSDAHSAAAPNLCETLLASATPKPGDIGCSFEGQQLLSLQRNHWAWGDVNECLGSKRSTGGDDHHLGVSAMKMKKMKSRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTRDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQTPSQLNDFLF* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02169 225 MobiDBLite consensus disorder prediction 210 225 - -
Pte1g02169 225 MobiDBLite consensus disorder prediction 200 225 - -
Pte1g02169 225 Pfam WRKY DNA -binding domain 149 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02169 225 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 114 209 IPR044810 GO:0003700
Pte1g02169 225 SUPERFAMILY WRKY DNA-binding domain 140 207 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02169 225 Gene3D WRKY domain 135 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02169 225 FunFam WRKY transcription factor 57 134 208 - -
Pte1g02169 225 ProSiteProfiles WRKY domain profile. 143 208 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02169 225 SMART WRKY_cls 148 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02169 Pte-Chr1 42726480 42728753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02169 118 213 WRKY Transcription Factor Family AT4G39410 86.458 4.86e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g02169 WRKY 8.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02169 - - cave:132166143 317.775