Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02149 GTTTTGCTCTTCTTCCTCTCTCTTCTTCTGTCTCATGTTTCTGCTTCGTTTCCGGAGCTCCGATCTCTGCTCGAATTCAAGAAAGGTATCCAAACCGACCCGCTTGGGAAAGTGTTCGACTCATGGGACCAGTCTTCACTGTCAGACTACAACGATTGCCCTCACTCCTGGACTGGCGTGTACTGTTCGGATGGCACAGGCAACATCTCTGCCATTGTATTGGATGGGTTTCAATTGTCTGGGGAGCTCAAGTTCCAAACTTTGGTTGGACTTGGCATGCTGAAGAATCTGAGCCTTTCTGGGAATCGGTTTAGTGGGCGACTTCCACCTGCATTGGGTACAATGACCTCTTTGCAACATTTGGATCTTTCTGGAAACCATTTTTATGGGCCGATCCCTGCTCGGATCAATGGACTTTGGGGATTGACTTACTTGAATCTGTCGAAGAATCAGTTCAAGGGTGGGTTTCCAAGTGAGATGGCGAATCTTCAGCAGTTGAGAGTGTTGGATTTGCATTCTAATGAACTCTGGGGTGACATTGCTGATGTTCTTTCTACACTGAGGAATGTCGAATATGTTGATTTGAGCTATAATAAGTTCTATGGTGGGCTGGCTCTTGCTTTAGAGAATATGTCTAGCTTGGCGAACACCGTGCATCACTTGAATCTGAGCCACAATAACTTAAATGGTGGGTTTTTTAGGCAAGATTCAATTGATATGTTTCGTAATTTGCAAGTGTTGGATTTGGTCGATAATCAGATCAGAGGGGAGCTTCCTTCTTTTGGAGCACTGCCTAGTCTTCGTGTGTTGCGGCTTGCCAATAATTTGTTGTTTGGGTCGGTTCCAGAGGAGCTTTTGGAGACTTCTATGCGTATAGAAGAGTTGGATCTCAGTGGCAATGGGTTTACAGGCTCAATACCTTTGATTAATTCCACTACTTTGACTACTTTAAATCTTTCATCAAATGGTCTGTCTGGGCCTCTGCCAAGTTCATTGAGCAACTGTATGATTGTGGATTTAAGCAGAAATATGTTATTTGGTGATATGTCTATGATGGAGAAGTGGGAAACCTCGTTAGAAGTTCTTGATTTGAGTTCAAACAAGCTGTTTGGAACCTTTCCAAACTTGACTATGCAGTTTGAGAGATTAACGACACTCAATCTGAGGAATAATTCCTTAATGGGTCCTTTGCCGTATGGGTTAGGTTCATACCAGAAACTGTCAGCTGTTGACTTCAGTTCCAATGAACTTAATGGGCCAATTCCTGGTAGTTTCTTCTCTTCAGGAACATTGACAAGCTTGAATCTGTCCGGAAATCGTTTTACAGGACAACTTCCTTTTCAAGGTTCACGAGCTAACCTCAAACTGCTAAATCTTGCAAATAATGGTTTTTCTGGACAATTGCCAAATGAATTAAGCAAACTGAGTTATTTGGAGGTTCTTGATTTGTCAGAAAACAATTTTACTGGTAAAATACCTGATAAGCTTGCAACCAGCTTGACTGTGTTCAACGTGTCCTACAATGATCTGTCTGGTTCTGTTCCAGAAAATTTAATGAGGTTTCCTACCTCATCCTTTCGCCCTGAAAATGATAAGCTGATTTTGCCTAATGATTCTCCTGAAGCTACTTCAGTTAACAACTTTTCTCCACATGGGAGACATCGTAACTCAAGGGGAAACATTAGAATAGCAATCATTCTTGCTTCTGTTGGTGCTGCTGTGATGATTGTTTTTGTTTTATTGGCTTATCATCGAGCACAACTTAAAGACTTTCGCGGAAGAAGTCAAATGGGTGGTCAAGACACAAGAAGAGATGTGAAGTCTCAGGCTTGTGAACCAGGAATGTTGGATGTATACTCACCAGATCGGCTTGCTGGAGAATTGCATTTCCTGGACGCTTCGCTGGCATTAACTGCTGAGGAGTTATCTCGAGCTCCAGCAGAAGTTCTTGGTAGGAGCAGCCATGGCACTCTGTACAAAGCTACCCTAGATAGTGGGCACATGTTGACTGTGAAGTGGTTACGGGTGGGACTTGTTAAACATAAAAAGGAGTTTGGTAGAGAAGTCAGAAGGATTGGTTCTATGAGGCATCCAAATATTGTTTCTTTACGTGCATACTACTGGGGACCTAGAGAACAAGAGAGGCTTCTACTGGCGGACTATGTACATGGAGATAGCTTGGCTCTACACCTTTATGAAACCACACCTAGACGGTATTCCCCACTATCGTTCAATCAGAGATTAAAGGTAGCCGTGGAGGTTGCCCGGTGTCTGTTATATCTTCACGATCGAGGATTACCCCATGGAAATCTGAAGCCAACAAACATTCTATTAGCTGGTCCTGAATATAATGCTCGTCTTTCTGATTATGGTCTGCACCGCCTCATGACACCAGCTGGTATTGCAGAACAGATACTCAATCTAGGAGCACTAGGATACCGGGCTCCAGAGCTTGCTGCTGCAAGTAAGCCGGTTCCCACCCTCAAGGCAGATGTCTATGCTCTTGGAGTGATTTTAATGGAATTATTGACCAGAAGAAGTGCCGGTGACATCATATCAGGCCAATCTGGGGCGGTTGATCTTACAGATTGGGTTCGGTTATGTGATCAAGAAGGCCGAGGAATGGACTGTATAGATAGAGACATTGCTGGTGGGGAGGAACCTTCCAAGGCAATGGATGAATTGCTCTCCATATCTCTGAGATGCATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTCTGGACGATCTCTGTTCTGTA 2766 0.4375 VLLFFLSLLLSHVSASFPELRSLLEFKKGIQTDPLGKVFDSWDQSSLSDYNDCPHSWTGVYCSDGTGNISAIVLDGFQLSGELKFQTLVGLGMLKNLSLSGNRFSGRLPPALGTMTSLQHLDLSGNHFYGPIPARINGLWGLTYLNLSKNQFKGGFPSEMANLQQLRVLDLHSNELWGDIADVLSTLRNVEYVDLSYNKFYGGLALALENMSSLANTVHHLNLSHNNLNGGFFRQDSIDMFRNLQVLDLVDNQIRGELPSFGALPSLRVLRLANNLLFGSVPEELLETSMRIEELDLSGNGFTGSIPLINSTTLTTLNLSSNGLSGPLPSSLSNCMIVDLSRNMLFGDMSMMEKWETSLEVLDLSSNKLFGTFPNLTMQFERLTTLNLRNNSLMGPLPYGLGSYQKLSAVDFSSNELNGPIPGSFFSSGTLTSLNLSGNRFTGQLPFQGSRANLKLLNLANNGFSGQLPNELSKLSYLEVLDLSENNFTGKIPDKLATSLTVFNVSYNDLSGSVPENLMRFPTSSFRPENDKLILPNDSPEATSVNNFSPHGRHRNSRGNIRIAIILASVGAAVMIVFVLLAYHRAQLKDFRGRSQMGGQDTRRDVKSQACEPGMLDVYSPDRLAGELHFLDASLALTAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFGREVRRIGSMRHPNIVSLRAYYWGPREQERLLLADYVHGDSLALHLYETTPRRYSPLSFNQRLKVAVEVARCLLYLHDRGLPHGNLKPTNILLAGPEYNARLSDYGLHRLMTPAGIAEQILNLGALGYRAPELAAASKPVPTLKADVYALGVILMELLTRRSAGDIISGQSGAVDLTDWVRLCDQEGRGMDCIDRDIAGGEEPSKAMDELLSISLRCILPVNERPNIRQVLDDLCSV 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02149 922 Gene3D Ribonuclease Inhibitor 19 183 IPR032675 -
Pte1g02149 922 Gene3D Ribonuclease Inhibitor 357 449 IPR032675 -
Pte1g02149 922 Gene3D Phosphorylase Kinase; domain 1 630 721 - -
Pte1g02149 922 FunFam Nuclear pore complex protein NUP107 16 182 - -
Pte1g02149 922 ProSiteProfiles Protein kinase domain profile. 644 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02149 922 PANTHER OS07G0626500 PROTEIN 6 94 - -
Pte1g02149 922 Pfam Leucine Rich repeat 311 326 IPR001611 GO:0005515
Pte1g02149 922 SUPERFAMILY RNI-like 263 493 - -
Pte1g02149 922 Gene3D Transferase(Phosphotransferase) domain 1 723 922 - -
Pte1g02149 922 FunFam Leucine-rich repeat receptor-like protein kinase TDR 242 535 - -
Pte1g02149 922 Pfam Leucine Rich repeats (2 copies) 243 281 IPR025875 -
Pte1g02149 922 Gene3D Ribonuclease Inhibitor 450 526 IPR032675 -
Pte1g02149 922 SMART LRR_typ_2 115 139 IPR003591 -
Pte1g02149 922 SMART LRR_typ_2 475 499 IPR003591 -
Pte1g02149 922 SMART LRR_typ_2 241 263 IPR003591 -
Pte1g02149 922 SMART LRR_typ_2 163 187 IPR003591 -
Pte1g02149 922 SMART LRR_typ_2 264 288 IPR003591 -
Pte1g02149 922 SMART LRR_typ_2 91 113 IPR003591 -
Pte1g02149 922 FunFam Pollen receptor-like kinase 1 722 922 - -
Pte1g02149 922 Pfam Leucine rich repeat 142 200 IPR001611 GO:0005515
Pte1g02149 922 ProSiteProfiles Leucine-rich repeat profile. 243 265 IPR001611 GO:0005515
Pte1g02149 922 Pfam Leucine rich repeat N-terminal domain 19 63 IPR013210 -
Pte1g02149 922 SUPERFAMILY L domain-like 46 343 - -
Pte1g02149 922 FunFam Leucine-rich repeat receptor-like protein kinase 629 721 - -
Pte1g02149 922 SUPERFAMILY Protein kinase-like (PK-like) 648 919 IPR011009 -
Pte1g02149 922 Pfam Protein kinase domain 648 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02149 922 Gene3D Ribonuclease Inhibitor 184 356 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02149 Pte-Chr1 42590566 42595114 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02149 1 919 Receptor kinase-like Gene Family AT5G01890 30.839 1.01e-109 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte1g02149 Pkinase 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02149 - - ini:109191706 1082.78