Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02148 ATGGATTGTCCCCCTATGCAATTTGTCTCCTCCAGAAGGATGAGTATGTATGCTCCTCTCCACCAAATTAGTACCTGGGGAGAAAATTTTAAGGGTAATGTTAATATGACCGCATCTGTGCCCGTAGTTGGGGAGGCTGACATGAAATTTGATACTCAGTCTGAGGATGCTTCTCAGGGAACACAAGGACCATCTCACAGATTTGATCAAGAATCAACTAGACGTATAGATAAGAAACAGAGACGCCTTGCGCAAAATCGGGAAGCTGCCCGCAAGAGTCGTCTAAGGAAAAAGGCCTACGTTCGGCAATTAGAGCAAGAACTACAGCAAGCAAGACAGCAGGGAATACATGTAAGCAGCGGACAAGATACTGATGATCTTGGCTTTGTTGGACCTGAAAATCCAGGTGTGATAACATTCGAGATGAAGTACGGTCTTTGGGTTGAAGAACAAAATAAACAGACTAGTGAGCTGAGGAATTGTTTAGATGGTCATATTGGTGATTCACAGCTCCGGATACTTGTAGAAAGTATTATGAATCACTATCATAAACTCTTTGCGATGAAATCAACTGCTGCAAAAGCTGATGTGTTCTATGTAATGTCTGGTATGTGGAAGGCCACAGCTGAATGGTTTTTCTTGTGGATTGGAGGGTTTCGTCCGTCGGAGCTCCTTAAGGTTCTTATGCCTCAAATGGACACATTAACAAAGGAGCAACTTTTGGATGTTTGTACCCTTAGACAATCATGTGAGGAAGCAGAAGATGCACTTTCACAAGGAATGGATAAACTTCAGCAAACACTATCTGAGACAGTAGCAGTCACTCAAATGGTTGAAGGAAATTACACCCCGCAGATTGCAATTGCCATGGGCAAGTTGGAGGCTTTGGTGATCTTTGTGAACCAGGCTGACCATCTGCGGCAGGAAACTCTGCAGCAGATGCAGCGAATCCTTACAGTTCGTCAGGCAGCTAAGTGCTTGCTTGCTTTGGGGGAATACTTTCAAAGGCTTCGGGTATTGAGTTCACTTTGGGCCGATCGTCGTCATGAACTTGTCTAG 1059 0.4438 MDCPPMQFVSSRRMSMYAPLHQISTWGENFKGNVNMTASVPVVGEADMKFDTQSEDASQGTQGPSHRFDQESTRRIDKKQRRLAQNREAARKSRLRKKAYVRQLEQELQQARQQGIHVSSGQDTDDLGFVGPENPGVITFEMKYGLWVEEQNKQTSELRNCLDGHIGDSQLRILVESIMNHYHKLFAMKSTAAKADVFYVMSGMWKATAEWFFLWIGGFRPSELLKVLMPQMDTLTKEQLLDVCTLRQSCEEAEDALSQGMDKLQQTLSETVAVTQMVEGNYTPQIAIAMGKLEALVIFVNQADHLRQETLQQMQRILTVRQAAKCLLALGEYFQRLRVLSSLWADRRHELV* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02148 352 SMART brlzneu 74 154 IPR004827 GO:0003700|GO:0006355
Pte1g02148 352 ProSiteProfiles DOG1 domain profile. 137 347 IPR025422 GO:0006351|GO:0043565
Pte1g02148 352 MobiDBLite consensus disorder prediction 53 67 - -
Pte1g02148 352 MobiDBLite consensus disorder prediction 52 95 - -
Pte1g02148 352 SUPERFAMILY Leucine zipper domain 78 114 IPR046347 GO:0003700|GO:0006355
Pte1g02148 352 Pfam Seed dormancy control 155 229 IPR025422 GO:0006351|GO:0043565
Pte1g02148 352 PANTHER TRANSCRIPTION FACTOR TGA9 8 349 - -
Pte1g02148 352 Gene3D - 77 118 - -
Pte1g02148 352 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 114 IPR004827 GO:0003700|GO:0006355
Pte1g02148 352 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Pte1g02148 352 MobiDBLite consensus disorder prediction 68 90 - -
Pte1g02148 352 Coils Coil 94 114 - -
Pte1g02148 352 Pfam bZIP transcription factor 77 110 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02148 Pte-Chr1 42582493 42584565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02148 1 350 Calmodulin-binding Proteins AT5G65210 61.749 1.10e-158 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte1g02148 DOG1 2.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02148 K14431 - gmx:100793353 466.848