Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02142 ATGGCAGCTTCCGTTTCTGCTTTAGCCATGAACGCTCCCAACCAATCCTTCGAATCCAGACACGGGTGTACAGCCAAATTGAATTCTTCTTCTTCCACTTGCTCTCCCTCTTCCTCTTCTCGCCTTCCTTGTAATGCAAAAGCATCAAGTCATTGGTCGAAGCTTTGTTTAAGTTCCATCTTTGCTCCTAATAACAAGTGGTCTATAATTTCTGACATTGGCATTGGGCTCATGTCGGCTTCCATTCTGGCTCTCACGCCCTTAGATGCCAATGCTACTAGAATTCAGTACTATGCCACTGTGGGCGAACCTTTGTGCGAACTCAACTATGCCAAGTCTGGCCTTGGGTACTGCGATGTCTCTGTAGGCTCTGGTATCCAACCACCCTTTGGCGAGCTAATTAATATCCATTATACGGCAAGATTTGCTGATGGAAGAGTATTTGATAGCAGCTACAAACGAGGTAGGCCTCTCACAATGCGCATTGGTGTTGGCAAGGTAATCAGGGGGTTAGATCAGGGAATTTTTGGTGGGGAAGGCGTACCTCCCATGCAAGCAGGTGGGAAACGCAAACTAATGATTCCTCCTGAATTAGCATATGGACCAGAACCAGCAGGGTGCTTCTCAGGTGACTGCAATATACCTGGCAATGCCACGCTTCTGTACGATATTAAGTTCATGGGTCTTTACAATGGAAATGGAAAATAG 708 0.4647 MAASVSALAMNAPNQSFESRHGCTAKLNSSSSTCSPSSSSRLPCNAKASSHWSKLCLSSIFAPNNKWSIISDIGIGLMSASILALTPLDANATRIQYYATVGEPLCELNYAKSGLGYCDVSVGSGIQPPFGELINIHYTARFADGRVFDSSYKRGRPLTMRIGVGKVIRGLDQGIFGGEGVPPMQAGGKRKLMIPPELAYGPEPAGCFSGDCNIPGNATLLYDIKFMGLYNGNGK* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02142 235 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 5 234 IPR044183 GO:0009507
Pte1g02142 235 SUPERFAMILY FKBP-like 110 227 - -
Pte1g02142 235 Gene3D - 104 229 IPR046357 GO:0003755
Pte1g02142 235 FunFam Peptidylprolyl isomerase 103 229 - -
Pte1g02142 235 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 131 226 IPR001179 GO:0003755
Pte1g02142 235 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 131 230 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02142 Pte-Chr1 42534194 42535767 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02142 98 228 Calmodulin-binding Proteins AT5G48570 36.364 5.61e-14 68.9