Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02138 ATGTCTTTGCAAGCAGCGAATCTCAACTTTGCTGCAGGAGTTATACCTAAGCAAAAGTCAAGTAAACAGTACTGGAATGGGAAGCATCTGGGGTGGGGTGGAAAGCTGGGAACAGTCTCATGTTATAGTGCTAAACGCGATGACAAGGTGGAAGTGTTTGAAAAGAAGACCAACTTCTACGAGGTGCTTTCTCTTGTTTCTGTAAATGTTGGGTTTGATGAGATTAAAAAGGCCTACAGAAGCATGGCTCTTAGGTACCACCCTGATGTTTGTTCTAATTCGTGTTGCTCGAAAGATGAGTCGACCAGAAGATTCGTGGATGTTCAGAAGGCTTATGAAACACTTGCTGACCCTGCATCACGAAGGATGCATGATTATGAGTTGGGGTTGATTCGCAATCATTCAAATGGTTTCAAGGGAAGTTCCGTTTACAGTGAATGGGACAAAGAAATTAGAAGGTATAACTTTCCCAAGCAAGTATGGGAAAGGCAACTCTGCGGGCTCAGAGAAAGGTCCGAAGTCAGAACGGAGAGGAAAAGATAG 543 0.4383 MSLQAANLNFAAGVIPKQKSSKQYWNGKHLGWGGKLGTVSCYSAKRDDKVEVFEKKTNFYEVLSLVSVNVGFDEIKKAYRSMALRYHPDVCSNSCCSKDESTRRFVDVQKAYETLADPASRRMHDYELGLIRNHSNGFKGSSVYSEWDKEIRRYNFPKQVWERQLCGLRERSEVRTERKR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02138 180 Pfam DnaJ domain 58 125 IPR001623 -
Pte1g02138 180 Gene3D DnaJ domain 45 153 IPR036869 -
Pte1g02138 180 CDD DnaJ 58 117 IPR001623 -
Pte1g02138 180 PRINTS DnaJ domain signature 79 94 IPR001623 -
Pte1g02138 180 PRINTS DnaJ domain signature 61 79 IPR001623 -
Pte1g02138 180 PRINTS DnaJ domain signature 100 120 IPR001623 -
Pte1g02138 180 SUPERFAMILY Chaperone J-domain 53 148 IPR036869 -
Pte1g02138 180 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 45 178 - -
Pte1g02138 180 ProSiteProfiles dnaJ domain profile. 58 128 IPR001623 -
Pte1g02138 180 SMART dnaj_3 57 120 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02138 Pte-Chr1 42511028 42511570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02138 60 125 C2H2 Transcription Factor Family AT1G74250 40.299 2.99e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02138 - - pop:7471528 155.606