Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02132 ATGGGCTGTTTCATTGGCAAGCCATTCTTGGACTCTCCATATCAGGATCTCCAGAGGAAGAAACTCGTTGACGGTTATTTCAGGGGACGCAGTGAAGTTACTCGAAACGATCAGAGACGGTTGAAGACACAACACTCCGGGCCCTTGAAGTCTCTGTTGGAAAATGAGACAAACGGTGATAAGTATGCAAATGGAGCTAAAAATGGTGGCCGAGCATGGGGAGGAGGAGGAGAGAGAAGAGTTTCAGAGAACAGAGAGAGAGAGACTGGGATTAGGAATCTTCCAACGAGAATTCCAAGGCCGCGGAAGAAGATTGAAGATGAGCTTGTAGATGGGTGGCCCAAATGGCTGGTTGATAATATTCCGAAACATGCTTTGGATGTTTTGGTTCCAAAAAGCGCTGACTCTTACGATAAGCTAGCTCAGATAGGGCATGGAACGTACAGTAATGTGTACAAAGCTCGAGAAAGGGCAACAGGTAAGATTGTTGCTCTTAAGAAAGTTCGTTTTAACACATCAGAGCCTGAAAGTATCAAATTTATGGCAAGGGAGATCAGGATATTACAGAAGCTAGATCATCCCAACGTGATCAAGCTTCGAGGACTAGCAACATCAAGGATGCAGTATAGTCTTTATTTAGTTTTTGATTTCATGCAATCGGATCTGACACGCATCATCTCCCATTCTAATTCGAGATTGACCGAAACACAGATCAAGAGTTATATGAAGCAGCTACTCGCTGGTCTCAGCCACTGCCATGAGAGGGGTATCTTACACCGAGATATTAAAACTTCTAATTTGTTGATTGACCGAAGAGGAGTGTTAAAAATTGCAGACTTCGGGCTAGCAAATTTCTTTTCTCCAAAATCTAAACAGTCACTTACGAATCGGGTGGTTACACTTTGGTATAGAGCTCCTGAGTTATTGTTAGGTTCAACCCACTATGGGCCTGGAATTGATATTTGGAGTGCAGGATGCCTACTTGCAGAAATGTTTGCAGGAAAGCCTCTTATGCCAGGGAGGAATGAGATTGAGCAGCTTCATACTATCTTCAAGCTTTGTGGTACACCCTCTGATGACTATTGGAAAACAAAGAGAGTGCCTGCAAACTTTCGACCACAACACAAGTATAAACCACGCCTGCAAGAAACATTCAAGAATTTTCCTAGCAGTGCTCGTGATCTATTGATCACACTTCTGGACCTGGACCCTGTACGTCGAGGCTCTGCTACATCTGCTCTTCAGAGTGAATTCTTCAATTCAACTCCATTGCCATGTGATCTCTCAGAGCTTCCGGAAATTCACAGTGACAAAAATGAAGCACTGCAAATCAAGATTTGTAAGAATCGCAGTTCTTTGGAGGAGAAAAAGCAGATCCAAGATGAGGTTCGTCTCGAAATTGAAGTTACAACAGACGAGTCTGAGTCTGTCAAAGAGGACAAAGAAGAGGAGTCAAGCACAGTGTGCGCATATACTTCGCACAGCACAAGCAGTACTGTTTCTGGTTCTAAATATTTTGAGAAGAAAATAAGCATGCCTGCTTCCATGTCTCCACTTCGTCAGGTTTATAAGTCCAGAATCCCAGAGAATCAATCACACCCCAACGGGCGTAAGAACCTCACAAGCTATTCCGGCATCTCGCAGCCATCCATTACAGATGTAATCAAAGATGGAGTTGGCAAACAGAATGGTCAAATTAGCAGAACCCTTTCGTTAAATTATCGATCTTTGGATCCTGACAGGATCCCTGAATTCCTGACATCGGATGAAGACTTCCCAGGCCATTACCTCTAA 1794 0.437 MGCFIGKPFLDSPYQDLQRKKLVDGYFRGRSEVTRNDQRRLKTQHSGPLKSLLENETNGDKYANGAKNGGRAWGGGGERRVSENRERETGIRNLPTRIPRPRKKIEDELVDGWPKWLVDNIPKHALDVLVPKSADSYDKLAQIGHGTYSNVYKARERATGKIVALKKVRFNTSEPESIKFMAREIRILQKLDHPNVIKLRGLATSRMQYSLYLVFDFMQSDLTRIISHSNSRLTETQIKSYMKQLLAGLSHCHERGILHRDIKTSNLLIDRRGVLKIADFGLANFFSPKSKQSLTNRVVTLWYRAPELLLGSTHYGPGIDIWSAGCLLAEMFAGKPLMPGRNEIEQLHTIFKLCGTPSDDYWKTKRVPANFRPQHKYKPRLQETFKNFPSSARDLLITLLDLDPVRRGSATSALQSEFFNSTPLPCDLSELPEIHSDKNEALQIKICKNRSSLEEKKQIQDEVRLEIEVTTDESESVKEDKEEESSTVCAYTSHSTSSTVSGSKYFEKKISMPASMSPLRQVYKSRIPENQSHPNGRKNLTSYSGISQPSITDVIKDGVGKQNGQISRTLSLNYRSLDPDRIPEFLTSDEDFPGHYL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02132 597 MobiDBLite consensus disorder prediction 488 502 - -
Pte1g02132 597 MobiDBLite consensus disorder prediction 526 545 - -
Pte1g02132 597 SUPERFAMILY Protein kinase-like (PK-like) 131 426 IPR011009 -
Pte1g02132 597 PANTHER CELL DIVISION PROTEIN KINASE 135 425 - -
Pte1g02132 597 FunFam probable serine/threonine-protein kinase At1g54610 124 219 - -
Pte1g02132 597 SMART serkin_6 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02132 597 FunFam Putative serine/threonine-protein kinase 220 457 - -
Pte1g02132 597 Gene3D Transferase(Phosphotransferase) domain 1 220 463 - -
Pte1g02132 597 Pfam Protein kinase domain 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02132 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Pte1g02132 597 Gene3D Phosphorylase Kinase; domain 1 127 219 - -
Pte1g02132 597 MobiDBLite consensus disorder prediction 470 502 - -
Pte1g02132 597 ProSiteProfiles Protein kinase domain profile. 137 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02132 597 ProSitePatterns Protein kinases ATP-binding region signature. 143 166 IPR017441 GO:0005524
Pte1g02132 597 MobiDBLite consensus disorder prediction 48 62 - -
Pte1g02132 597 MobiDBLite consensus disorder prediction 34 87 - -
Pte1g02132 597 MobiDBLite consensus disorder prediction 470 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02132 Pte-Chr1 42462242 42466831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02132 132 458 Core Cell Cycle Gene Families AT5G10270 47.246 1.01e-97 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte1g02132 Pkinase 7.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02132 K08819 - qsa:O6P43_030391 588.956