Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02128 ATGTGCGTACGAAAGGTGGCGGATCCACGAGAGAAAGCAAAGAAAGTTGACGATGGAGCCTTGGATGAGTGGCTGCATCAACAATTGGTAACCTTCGAAAATGACAGCAATCCAATATTTCCAGCTCTCAGCAGAGACAGGGAAATCTCTGAAATGATTTCTGATCTGACATATGTGTCAGGCGACATGCCATATAATCATTTGATTTATCATGATCAGTACCCTAATATTAGTGAGCATGATATTGCAACACCTGCTATCCGGACACCTAGCTTTGCTGCACCTTCAGGGTCCATGTCTATGTCTTCATCGTTATCTTCTTCTTTTGGCCTTAGCGGTCATAAGAGAGGAATAGAAGATGCTAGCGATGGAGACCCGGGTGAGTCAGTGACAAGGGTTTCTAGACCATTTGGTGACTTTCACTTTGCACATGGAAGCTCGTCCTCTGTTCTACCAAGAATGAATACAGCCCCGGAAAGTGCAAGCATCTGTGTCACTACCTTGGTAACAACAGAAACAGCATTAGCTCCTGTATACGAATACAGTAGACAGAATGTTAGAGATGAAACAAGAAGAAAGTACAGGGGAGTGAGACAGAGACCTTGGGGGAAATGGGCTGCGGAAATTAGAGACCCGTTCAAGGCTGCCAGAGTTTGGTTAGGCACATATAACACAGCTGAAGCAGCCGCGAGAGCCTACGACGAAGCTGCACTGAGGTTTAGAGGCAACAAGGCAAAACTCAATTTTCCAGAAAACGTAACGCTTAGGCAACCAGCTATCAGTCCAGTAGCGTCCCAGTTGAGAATTTCAAGTTCTCCAAGTACCCTTGCGTCTATTTCCACGTCTACCGAGCCGATTGTTCATACTCGAGCTGATAGTCACTATTTGCAAAACAGGCAGGAGGTGAAGAACAACGAACCCAGTTATCCTCAGAGTCAGAGAGTGGATTTTCAGAGCCATCCCATGAGGTTATACAGTCACATGATCATGCAACAAACAGATATAATGGTTTCTCAAGCACTGTTGTCATCTTTATCGGCACCTCCCCAGGCACCCACATCTTCGTCGTCGCCTCCTTCTATAGTTTCTGTGTCTTCAGCATCTTCGCTACCACTGTCACTTCCATTGTTTCGCACAGTTCAGCGACCGGCTCAGTCTAGAGTTGCCATTGATCCACAGACTAGCGGTTCAAATTCCACGAGAGCAAGGTGGTCGGATTGCTCTCGTCAACCCCCGTCTTCTGGATAA 1248 0.4655 MCVRKVADPREKAKKVDDGALDEWLHQQLVTFENDSNPIFPALSRDREISEMISDLTYVSGDMPYNHLIYHDQYPNISEHDIATPAIRTPSFAAPSGSMSMSSSLSSSFGLSGHKRGIEDASDGDPGESVTRVSRPFGDFHFAHGSSSSVLPRMNTAPESASICVTTLVTTETALAPVYEYSRQNVRDETRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTYNTAEAAARAYDEAALRFRGNKAKLNFPENVTLRQPAISPVASQLRISSSPSTLASISTSTEPIVHTRADSHYLQNRQEVKNNEPSYPQSQRVDFQSHPMRLYSHMIMQQTDIMVSQALLSSLSAPPQAPTSSSSPPSIVSVSSASSLPLSLPLFRTVQRPAQSRVAIDPQTSGSNSTRARWSDCSRQPPSSG* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02128 415 Gene3D AP2/ERF domain 192 252 IPR036955 GO:0003700|GO:0006355
Pte1g02128 415 CDD AP2 193 252 IPR001471 GO:0003700|GO:0006355
Pte1g02128 415 MobiDBLite consensus disorder prediction 386 415 - -
Pte1g02128 415 FunFam Ethylene-responsive transcription factor 2 192 251 - -
Pte1g02128 415 PRINTS Ethylene responsive element binding protein signature 216 232 IPR001471 GO:0003700|GO:0006355
Pte1g02128 415 PRINTS Ethylene responsive element binding protein signature 194 205 IPR001471 GO:0003700|GO:0006355
Pte1g02128 415 PANTHER DNA-BINDING DOMAIN 162 306 IPR044808 GO:0003700|GO:0009873
Pte1g02128 415 ProSiteProfiles AP2/ERF domain profile. 193 250 IPR001471 GO:0003700|GO:0006355
Pte1g02128 415 SMART rav1_2 193 256 IPR001471 GO:0003700|GO:0006355
Pte1g02128 415 MobiDBLite consensus disorder prediction 381 415 - -
Pte1g02128 415 Pfam AP2 domain 193 242 IPR001471 GO:0003700|GO:0006355
Pte1g02128 415 SUPERFAMILY DNA-binding domain 193 251 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02128 Pte-Chr1 42440925 42442693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02128 182 255 AP2-EREBP Transcription Factor Family AT5G61890 75.676 8.61e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g02128 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02128 - - qsa:O6P43_030387 253.447