Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02119 ATGCTGCTGGAAAACTCTGCTTTACCGGAAAATTCTGGAGCTTCCGTCGGAAACTGGGTTAACAATGGGGAAGAAGAGAGAGTTGGGGATGGCGATGGACCCACGTGGATTGGCAATCGTTGGCCTCGTGTGGAGACACTGGCTTTACTAAAGATAAGGTCCGAAATGGATATTGCTTTCAGGGATGCTAGCCCCAAAGCTCCTCTCTGGGAACAGGTTTCCAGGAGATTGGCTGAGCTAGGATATAACAGGTCTGCTAAGAAATGCAAGGAGAAGTTTGAGAACGTCTCAAAGTACCACAAAAGGGTCAAAGAAGGCCATCCTGTTCGAACCAATGGAAAGGCTTATCGTTTTTTCGAGCAATTAGAAGCTTTAGATAGCAACCCGTTGCTTGTGGGTCCTGCTGCAGTAAAAAATGACACTTCTGTGGTTGGCACAGCAGTTGATACGATGAAAATTAATCCTGAAAACGTGATTCAAGATGCTATGCGCTGTTCAATTTTGATGCATTTCGAGAACACTATGGATAAATCAGGTTCTGCCACGTCATCTTCAAGTAAAGAATCAGGAGGTATATGCAAGAAGAGGAAACTTGCAGAGTTTTTTGAAATGTTAATGAATCAAGTTGTCGAGAAGCAAGAGAATCTACAGAAGAAATTCATGGAGGCGTTAGAAAAATGTGAGCGTGATCAAATGGCTAGAGAAGAAGCTTGGAAAAATCAAGAATTGGCGCGAATTAAGAGGGAGAGGGAGCTTTTGGCTCAGGAAAGATCAGTTGCTGCTGCAAAGGATGCAGCTATACTTGCTCTTCTAAAGAAATTTACAGAACAGGAAGTGCCTCTACAATTACCCGAGAATATTCAGGTTCAGAATCTTGTTCCACTGGGGAATGAAAAGGAGAAGGAAAGCGGTGATAGTGGCAACGTAATTGATAAGCAGAAAGAAACAAACCGCGGCGGGTTCTCAATGCAGTTGAGCTCATCAAGATGGCCAAAAGCTGAGGTGGACGCTCTGATTAGTCTGAGGACTAACCTTGACATGCACTACCATGAAAATGGATCTAAAGGGCCATCGTGGGAAGAGATATCTTCTGCAATGCAAAGGCTTGGTTATGATCGCAGTGCAAAGAGATGCAAGGAGAAATGGGAAAACATAAACAAGTACTTTAAAAAGATGAAAGAAAGGAATAAGGGGAGGCCTGAAGATTCTAAAACTTGCCCTTATTTTCTGCAACTCGAGGCCTTATACAGTAAAAAGCCGAAGACGGTTGCTGATTCTACTGGTTCTGCCAATGACACGAGGGCCGAGGAGCTCTTGATGCATATAATGAGCGGTCAAGAGGTGCAACAGCCACCCAAGTCAGTAACTGATGATGAAAACCAAGAGAACCATAGAAACGATCAAAAAGGATATGTTCAACATGGTGAAAGTGATGAATATGATTTTGTAGATGACAATAACTGCCCCCATCGATCTAATTGA 1482 0.4332 MLLENSALPENSGASVGNWVNNGEEERVGDGDGPTWIGNRWPRVETLALLKIRSEMDIAFRDASPKAPLWEQVSRRLAELGYNRSAKKCKEKFENVSKYHKRVKEGHPVRTNGKAYRFFEQLEALDSNPLLVGPAAVKNDTSVVGTAVDTMKINPENVIQDAMRCSILMHFENTMDKSGSATSSSSKESGGICKKRKLAEFFEMLMNQVVEKQENLQKKFMEALEKCERDQMAREEAWKNQELARIKRERELLAQERSVAAAKDAAILALLKKFTEQEVPLQLPENIQVQNLVPLGNEKEKESGDSGNVIDKQKETNRGGFSMQLSSSRWPKAEVDALISLRTNLDMHYHENGSKGPSWEEISSAMQRLGYDRSAKRCKEKWENINKYFKKMKERNKGRPEDSKTCPYFLQLEALYSKKPKTVADSTGSANDTRAEELLMHIMSGQEVQQPPKSVTDDENQENHRNDQKGYVQHGESDEYDFVDDNNCPHRSN* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02119 493 ProSiteProfiles Myb-like domain profile. 39 97 IPR001005 -
Pte1g02119 493 PANTHER FI21293P1 21 468 - -
Pte1g02119 493 Gene3D - 330 391 - -
Pte1g02119 493 Gene3D - 41 102 - -
Pte1g02119 493 MobiDBLite consensus disorder prediction 1 34 - -
Pte1g02119 493 ProSiteProfiles Myb-like domain profile. 322 386 IPR001005 -
Pte1g02119 493 CDD GT1 328 393 - -
Pte1g02119 493 Pfam Myb/SANT-like DNA-binding domain 39 125 IPR044822 -
Pte1g02119 493 Pfam Myb/SANT-like DNA-binding domain 328 415 IPR044822 -
Pte1g02119 493 SMART sant 37 99 IPR001005 -
Pte1g02119 493 SMART sant 326 388 IPR001005 -
Pte1g02119 493 Coils Coil 206 230 - -
Pte1g02119 493 MobiDBLite consensus disorder prediction 457 493 - -
Pte1g02119 493 FunFam Trihelix transcription factor GT-2 330 391 - -
Pte1g02119 493 CDD GT1 39 104 - -
Pte1g02119 493 FunFam Trihelix transcription factor GT-2 41 102 - -
Pte1g02119 493 MobiDBLite consensus disorder prediction 442 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02119 Pte-Chr1 42373945 42376420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02119 201 421 Trihelix Transcription Factor Family AT1G76880 52.869 3.02e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte1g02119 Myb_DNA-bind_4 1.2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02119 - - qsa:O6P43_023330 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02119 1 42373945 42376420 Pte1g02119 1 42373945 42376420 RCT