Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02107 ATGGCAGGAGTTCTTGGTGATGGATTCATGGCAAGTGGTCTCACAATTCAAAACACAGCAGGCCCAGTTGCTCACCAAGCAGTGGCCTTAAGATTAGACAGCGACCTCTCTTTCATTGAGAACTGTGAATTTCTAGGCAATCAAGACACACTTTATGCTCACTCCTTGCGCCAATTCTATAAGTCCTGCCGCATCCTAGGAAATGTGGACTTCATATTTGGAAATTCAGCATCTGTTTTCCAGGACTGTACAATCTTGGTCCGTCCCCGACAAGTCAAGCCAGAAAAAGGTGAGAGCAATGCTGTCACGGCACATGGCAGGACAGACCCGGCTCAATCAACAGGCTTTGTCTTCCAAAACTGTTTGATAAATGGCACAGAGGAGTACATGGCACTATACCGTAGCAAACCTGCAGTACATAAGAATTACTTGGGGAGGCCATGGAAAGAGTACTCAAGGACAGTGTTCATTCATTGTAATTTGGAGGCTCTAATTACACCACAGGGATGGATGCCTTGGACTGGTAATTTTGCTTTGAAAACACTGTATTATGGAGAGTTTGAGAATTCAGGACCTGGGTCTAATTTGTCTGAGAGAGTGAACTGGAGTAGTCGTATCCCAGCTGAGCATGTTTCTACCTATTCAATAGAGAATTTTATTCAAGGGGACGAATGGATCACATCAACTTAA 690 0.4435 MAGVLGDGFMASGLTIQNTAGPVAHQAVALRLDSDLSFIENCEFLGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASVFQDCTILVRPRQVKPEKGESNAVTAHGRTDPAQSTGFVFQNCLINGTEEYMALYRSKPAVHKNYLGRPWKEYSRTVFIHCNLEALITPQGWMPWTGNFALKTLYYGEFENSGPGSNLSERVNWSSRIPAEHVSTYSIENFIQGDEWITST* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02107 229 PANTHER PECTINESTERASE 4 227 - -
Pte1g02107 229 SUPERFAMILY Pectin lyase-like 4 227 IPR011050 -
Pte1g02107 229 Gene3D - 1 229 IPR012334 -
Pte1g02107 229 Pfam Pectinesterase 4 223 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02107 Pte-Chr1 42276707 42277396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02107 3 225 Carbohydrate Esterase AT5G09760 77.578 2.73e-133 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02107 - - pop:7486096 421.394