Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02106 ATGAACACTACCCACCACCTCAGAAAACCCATTAAAACCATTTCGTCATTCTCATTCTTCAGATCCACCTTCTTCATGCTTTCAATGGCCACCGTCTTCGTCATTTCTCTCGTATCGCTTCTCCTCTTATTCTGTTTCTCCTCTGCTTCACACCATCACCATTCTCATCCTGCATCGCCGAATCTCCCAAAAAACCCTTCACACAACCCCACAGTCAATTCGGTCCCACTGGTAATCCAACAAGCTTGCAAGGCCACCCGTTTCCCTGATTCATGTCAATCCTCCCTGACTCAATCCACCAGCCCGGTCCCTCCCAACCCGAACCCGCTTCAAATAATCCAAGCAGCAATCCGGGTATCCTCAGACAACCTTGCGACCGCCCAGTCCATGGTCAAATCCATTCTGGACTCTTCCGCGGACAATCTGAATCGCACGACCGCTGCAAATAACTGCATTGAGGTGCTGCATAACTCCGACTACCGTATCTCCATCACAAAAGATGCGCTGACACTTGGAAAGAATAAGGATGCTCGGGCTTGGATGAGTGCCGCGTTACTTTATCAGTATGACTGCTGGTCAGCCCTCAAGTACGCCAACGATACTCAAATGGTGAGCAAAACGATGGCATTTTTGGACGCGCTCACTCGTCTCTCAAGCAACGCGCTGAGCATGTTAGTGTCGTTTGATACCTTGGGAAACGACAGCGCTTCATGGAAGCCTCCCATGACAGAGCGAGACGGGTTCTGGGAGACGTCCGGGTCGGGCGCTGGGTCCGGAACTGGAATCAAGGTACGCTTCCCGCCTGCTGAGTCGGCGGACGTTACAGTCTGTAAAGACGGTAGCAATGGGTGCTACAAGTCCGTACAGGAAGCCGTTAACGCGGCACCGGATAACGCTGGCGCCAAAAAATTTGTGATCCACATTCAAGAAGGAGTCTACGAGGAGATAGTCAGGGTGCCGTTAGAAAAGAAGAACGTAGTATTCTTGGGGGATGGAATGGGTAAAACGGTAATTACTGGTTCCTTAAAGGCGGACCAACCTGGAATTTCAACCTACAACACAGCTACGGTCGGTAAGTTATCGTTGATTCATTGTGTTATTTTGGATATGTTAAGGCAGTATTTGCTTATCTCTGCACGATTTTCTATTGAAGACTTCGGTTTGTATGCTATTTATCAATATTGCATGTAA 1191 0.4895 MNTTHHLRKPIKTISSFSFFRSTFFMLSMATVFVISLVSLLLLFCFSSASHHHHSHPASPNLPKNPSHNPTVNSVPLVIQQACKATRFPDSCQSSLTQSTSPVPPNPNPLQIIQAAIRVSSDNLATAQSMVKSILDSSADNLNRTTAANNCIEVLHNSDYRISITKDALTLGKNKDARAWMSAALLYQYDCWSALKYANDTQMVSKTMAFLDALTRLSSNALSMLVSFDTLGNDSASWKPPMTERDGFWETSGSGAGSGTGIKVRFPPAESADVTVCKDGSNGCYKSVQEAVNAAPDNAGAKKFVIHIQEGVYEEIVRVPLEKKNVVFLGDGMGKTVITGSLKADQPGISTYNTATVGKLSLIHCVILDMLRQYLLISARFSIEDFGLYAIYQYCM* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02106 396 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 225 IPR035513 -
Pte1g02106 396 NCBIfam pectinesterase inhibitor domain 40 224 IPR006501 GO:0004857
Pte1g02106 396 CDD PMEI-like_3 82 224 - -
Pte1g02106 396 PANTHER PECTINESTERASE 40 358 - -
Pte1g02106 396 Gene3D - 269 373 IPR012334 -
Pte1g02106 396 Pfam Plant invertase/pectin methylesterase inhibitor 79 224 IPR006501 GO:0004857
Pte1g02106 396 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 228 IPR035513 -
Pte1g02106 396 Pfam Pectinesterase 273 358 IPR000070 GO:0030599|GO:0042545
Pte1g02106 396 FunFam Probable pectinesterase/pectinesterase inhibitor 51 77 227 - -
Pte1g02106 396 SMART PMEI_2 74 224 IPR006501 GO:0004857
Pte1g02106 396 SUPERFAMILY Pectin lyase-like 269 357 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02106 Pte-Chr1 42274872 42276062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02106 63 358 Carbohydrate Esterase AT5G09760 61.745 2.23e-120 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02106 - - qsa:O6P43_023358 424.091