Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02105 ATGAGTGGAAATTCCAGAAAGCGCTCTTCGAAGTGGGATTTGAGAGAGGAGCTTGAAAGCAAGCAGTTGCGACCTTCCTGGTCCTCTAGAGATAGTCAACGTCGTAATGGTTCGAAGTGGTCTTATATGGAAGAGGCTGATAAGATGAGTTCTGAAAATGATATGGAATTTTCTTCAAAGGAAAATTACCATGGGAGCAGAGGTTCACATATGGATGACACCATCAAGAAGGACTCTCGTAGAGCTGCAGATGCCTCAATGGCATGGGATAGAGACAGCAATTATGGCTCAAGAATGTCACGTGGACTTGAGGAACGGGGACATGGGAGTCACAGTCGATCCCCCAAAAACATTTTGCATCGCTCGGTCAGGAGCAGGAGCAGGAGCAGGAGCAGGAGTGCTGAGCGGGTTTATAGGAGGGATATGGGAGCTCATGACAGAACCAGAAGCAGGTCTGGAGCAACAGCACAAATTTGTAGAGAATTTGTTGCTGGGAATTGTAGACGAGGAAGCCATTGCCATTTTCTTCATGATGTTGACAAAAATTATGACGATAACAGGGAAACTAGATACAGGATCGATGGAGCTTCAAGGTATGTGCGTCATAGCGTCTCTGATGGACTCAGTCAGGGTGTCACTGATGAATTGACTAGAGAAAGAGAATTTGACCGAAGGAGCATAGAAAACTCTTTTGAGCAAGTTAGGCAAGAGCCTGGACGAAGTATTGATACTCCTTGTAAATTTTTTGCTGCTGGACATTGTCGCAATGGTAAATACTGCCGATTTTCTCACGATGAACAAGCATTTGCTAGCCCCAAAGAAAGATCGAAGGATGAGAGGCGGGGACACGGTCGAAGTGATGGAGAGCAGGTATGGGATCATCCAAGACGGAGTGAAAATAGTAGTCCGAAAAGAGGCTTTAGAGATGACAAGCGTGACTTATATCATGATATCGTTGATGTAAACAAGGTATGGAATGGCCCGACATGGGATGAAGTAGGTGCGGGCTCAAAAGCTGCCAAAATGGACACTAGTAAAAGTATGAATCCACCAAAATCTGGGTCCACTTCTTGGCCCGTGAATGATCAATGGGATCATAAGTTAGAGGGCAATATCAAAGTCATTTCTAAACACACAACTGAGAGTGGTAAAGAGGAAAGTAACCAATGGGAGATGCAGAAGGCTGGTGCGAACATGAATCTTACTGATGCAGGCAGTGCAGATAAATGGATTAGCGATGTGGACATGTCACCTGACTGGCATTATAAGTTGGAATCTTCCAACTTTGTTTCTAAAGAAGAACAAGCACAGAGCAAGAGCAATTTACCTGGTGAGGTGACTTATCTTACCTCTCACAATCACGACAGAACTGATACTCTTCCAGGGCAAAGCTTCAGTGAGAATAGGCAATTGCATGCCCCAGGCACACATGCAATTGTAAAAACTCAAGCAATTGTGCCTGATATTCCTTCAACTGGAAATTATCTTGAAGGTCCACATGGAAAGTTAGGCTATGCGGACACCCACGGAAATATCCAACCTAATGTTGGAAAGGCAAGCCCATTGCAAGTTAATTCTACTATTCCACCAACTCAGAATACAGTCAGCAGTGATCAACTTTCCCAACTTACCAACCTCTCGGCCTCTCTGGTACATCTTTTAGGAAAAGGTCAGCAACTTCCACAACTGTATGGCACCCTTGATTCCCACGATTCAAAGACTGATACTTCTTTTGGCAATACCGAGGGGCCTCGTGAACCAGCTACTTCAAACACAATTCAGCCAAATCCTACTACTGGAATTCAGAAGCAGCATGATCCAGTATGCAATAGGCTCGAGACCAAGAATACTGATGTGTTTGCAGCGCCCCCAACTTCCTCCCGTAATTCTGTTGGACAGAAAGAAGTTTTGGCAGAGAAACTAGAAAGGCGTTCTCTGACACCTATTTCAGATAAAGTTGGAGATCGTTGTAATGTTGGCAATGCAGATGAACAAAAATCTGACAAGAGTGAGCGGATGATGAAATCGCAACTGGTTAAACAATGTGAGAATACTACAGAGAATAATGTAGCCATGGTGGATGGTGGCAAAACTGTTGAGGATGATGATAGAAGGGAGAAAAAGAATGTAACCTCAGAAAATATGGAAAGAGATGGTGACACTGATGAGGACAAGAAGATAAAGGATTCTAAGGTGACTCGTGCATTTAAGTTTGCGCTGGTGGAGTTTGTCAAGGAGCTTCTGAAGCCTACGTGGAAGGAAGGGAAAATTACTAAAGAAGGTTACAAAACCATAGTGAAGAAAGTTGTTGACAAGGTAACTGGATCTGTGCAAGCAAATCACATTCCTCAGACACAGGAGAAAATTGACCAGTATTTGTCATTTTCAAAAGCAAAACTTAACAAATTAGTACAGGCGTATGTGGAGAAGGTCCAAAAGGCTTAG 2445 0.4372 MSGNSRKRSSKWDLREELESKQLRPSWSSRDSQRRNGSKWSYMEEADKMSSENDMEFSSKENYHGSRGSHMDDTIKKDSRRAADASMAWDRDSNYGSRMSRGLEERGHGSHSRSPKNILHRSVRSRSRSRSRSAERVYRRDMGAHDRTRSRSGATAQICREFVAGNCRRGSHCHFLHDVDKNYDDNRETRYRIDGASRYVRHSVSDGLSQGVTDELTREREFDRRSIENSFEQVRQEPGRSIDTPCKFFAAGHCRNGKYCRFSHDEQAFASPKERSKDERRGHGRSDGEQVWDHPRRSENSSPKRGFRDDKRDLYHDIVDVNKVWNGPTWDEVGAGSKAAKMDTSKSMNPPKSGSTSWPVNDQWDHKLEGNIKVISKHTTESGKEESNQWEMQKAGANMNLTDAGSADKWISDVDMSPDWHYKLESSNFVSKEEQAQSKSNLPGEVTYLTSHNHDRTDTLPGQSFSENRQLHAPGTHAIVKTQAIVPDIPSTGNYLEGPHGKLGYADTHGNIQPNVGKASPLQVNSTIPPTQNTVSSDQLSQLTNLSASLVHLLGKGQQLPQLYGTLDSHDSKTDTSFGNTEGPREPATSNTIQPNPTTGIQKQHDPVCNRLETKNTDVFAAPPTSSRNSVGQKEVLAEKLERRSLTPISDKVGDRCNVGNADEQKSDKSERMMKSQLVKQCENTTENNVAMVDGGKTVEDDDRREKKNVTSENMERDGDTDEDKKIKDSKVTRAFKFALVEFVKELLKPTWKEGKITKEGYKTIVKKVVDKVTGSVQANHIPQTQEKIDQYLSFSKAKLNKLVQAYVEKVQKA* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02105 814 MobiDBLite consensus disorder prediction 128 148 - -
Pte1g02105 814 SUPERFAMILY CCCH zinc finger 155 178 IPR036855 GO:0046872
Pte1g02105 814 ProSiteProfiles Zinc finger C3H1-type profile. 245 267 IPR000571 GO:0046872
Pte1g02105 814 ProSiteProfiles Zinc finger C3H1-type profile. 153 180 IPR000571 GO:0046872
Pte1g02105 814 MobiDBLite consensus disorder prediction 651 672 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 37 87 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 113 127 - -
Pte1g02105 814 Gene3D - 143 205 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 566 604 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 342 362 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 335 363 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 657 672 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 267 309 - -
Pte1g02105 814 SUPERFAMILY CCCH zinc finger 244 265 IPR036855 GO:0046872
Pte1g02105 814 Pfam CCCH-type zinc finger 158 178 IPR041367 -
Pte1g02105 814 MobiDBLite consensus disorder prediction 97 112 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 693 725 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 696 725 - -
Pte1g02105 814 Coils Coil 797 814 - -
Pte1g02105 814 Gene3D - 210 275 - -
Pte1g02105 814 MobiDBLite consensus disorder prediction 1 151 - -
Pte1g02105 814 SMART c3hfinal6 240 266 IPR000571 GO:0046872
Pte1g02105 814 SMART c3hfinal6 154 179 IPR000571 GO:0046872
Pte1g02105 814 MobiDBLite consensus disorder prediction 8 24 - -
Pte1g02105 814 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02105 Pte-Chr1 42261407 42268174 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pte1g02105 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02105 - K22909 qsa:O6P43_023359 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02105 1 42261407 42268174 Pte1g02105 1 42261407 42268174 RCT