Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02104 ATGGACATAAATCATGTGCATATGTTTCAAAACCAAATTGCCAGCAGCTTTGATCGTTCAATATGGCCAAACTCTATTCAAACGTATCAAATACCGTCATCTTCCTCCTCCTCCTCAAACCAAAACATGCCCTCTTCAAGTACCCTTGGTGACATGTTAGCGCACTTCGAAGAGGATGAAGAAGCAGAAGAAGAACTCGGTGCCATGAAGGAGATGATGTACAAGATTGCAGCTATGCAGCCTGTGGATATTGACCCTGCTACCATCCGTAAGCCCAAAAGGAGAAACGTCCGGATCAGTGATGATCCCCAAAGTGTAGCTGCACGTCTCAGGCGAGAGAGGATCAGTGAGAAAATTCGCATCCTGCAGAGACTTGTCCCTGGTGGAACAAAGATGGACACGGCTTCTATGCTTGATGAAGCCGTTCGCTATGTCAAGTTCTTGAAAAGACAAATCCGGCTGCTACAATCAAATCAATTACAACCTCAACAACAACAATCCAGCTTAGGAATCAACCACAATAATGTTAACACAGATTCAGCTGGATGCTCAAGTACCCCTCCAGATCTGTGGCCCTTTGCACCCCACAGCAAACCGAACACTGCTCCCAAAACTACTTCAGTGCAAGAAGCATTGGTTGCAGTTGGAACTGGATTTAGTATTGGAAGAACATGCTGCTAG 681 0.4552 MDINHVHMFQNQIASSFDRSIWPNSIQTYQIPSSSSSSSNQNMPSSSTLGDMLAHFEEDEEAEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARLRRERISEKIRILQRLVPGGTKMDTASMLDEAVRYVKFLKRQIRLLQSNQLQPQQQQSSLGINHNNVNTDSAGCSSTPPDLWPFAPHSKPNTAPKTTSVQEALVAVGTGFSIGRTCC* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02104 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 99 148 IPR011598 GO:0046983
Pte1g02104 226 MobiDBLite consensus disorder prediction 170 205 - -
Pte1g02104 226 Gene3D - 103 170 IPR036638 GO:0046983
Pte1g02104 226 MobiDBLite consensus disorder prediction 170 185 - -
Pte1g02104 226 CDD bHLH_AtIND_like 100 153 - -
Pte1g02104 226 Pfam Helix-loop-helix DNA-binding domain 109 148 IPR011598 GO:0046983
Pte1g02104 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 104 168 IPR036638 GO:0046983
Pte1g02104 226 SMART finulus 105 154 IPR011598 GO:0046983
Pte1g02104 226 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 24 181 IPR045843 GO:0003700|GO:0006355
Pte1g02104 226 MobiDBLite consensus disorder prediction 30 49 - -
Pte1g02104 226 FunFam BHLH transcription factor 102 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02104 Pte-Chr1 42255215 42255895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02104 53 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 68.800 9.94e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g02104 HLH 1.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02104 - - gmx:100775296 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02104 1 42255215 42255895 Pte1g02104 1 42255215 42255895 RCT