Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02071 ATGAAGTTAAAGTTGATCGGAGATCGGAAAGAAGGCGACGGCGATTACATCTCTGATGATGATCGCAGTGGTAGTGGTCGGACGGTCTTAGTAGGTGTTAAGTTGGATTCTTACAGCAGAGAATTGCTAACTTGGGCTCTTGTTAAAGTCGCTAGACCGGGCGACCTTGTTATTGCTCTTCATGTCCTCGACGCCATCAAAGAGTGCGCAGCATCGGTTATCTCTCTCGTGAAGACTTTCGACTCTGTTCTCTCTGTATATGAAGGTTTCTGCAACTTGAAACAGGTTGATCTGAAGCTTAAGGTAATCAGAGGTTCTTCGCCTCGAGAAATTATAGTTCAGGAAGCAAAAGCCCACGGTGTCGCGACTGTGATAGTAGGAGCTTCTAGAACCCACCATAGAATTCGTTCGAATGCATCCGTTGCTAAGTACTGTTCGAGGAAATTGCCCAAGTGTTCCTCTGTTTATGCGGTTGATAGTAGCAAAATTGTGTTCTGCAGAGAAGCCACCAAAACATTGAAATCAAATCAAGGCCTTGGTTATTCGAGAAGATCATTGTCAGACTCTACTAAAAAAATTAGGGAGAGTTGCGAACGTTGTGCTACGAACTCAGTATCACCGGTGCGTGAAGTTTTGGAAAAGGAAATTTCATTGGCGTTAGTACCAGTTCAAAGGGTAGTAGCTAAGGAATCAAAGCATGGTTGGTCGATCCTTAGACAAGTACTTTTTCCTGATAAACATATGGAGAAGTCTTTTCTGGGTAAGTTCTCTCTTTCCAATTGGGTAAGGAGACAATCCACTTGGCACCCCTCGGCTGCGGTATTCCCAGATCAGAAACAGATATGTTCTGATTCGAATGATGGTTCCACTCTAAATGGTGAAAATGGTGCAATAGTGCCATATGGATCCAACGCTGACGATAGCTTCAAGAGCCTGCCGAAGGAGCTGCTGGATTTACGGGAAAAGTACTCATTTAAGTGCATAATATATAATTATGGGGATCTTGCTTCAGCAACTGCTAACTTCAGTGATGAAAGATTTGTTGGGAAAGGTGGAAGTAGCCGCGTTTTTAAAGGATATATTCCACATGGCAAGGAAGTAGCAGTAAAAATCTTGAAGCGTTCTGAAGATGTGCTAAAAGAATTTGTCCAGGAAATTGAGATCATTACAACATTGCAGCATAAGAACGTAGTATCTCTATCTGGATTTTGTTGTGAGAATGATAAGTTGTTACTGGTCTACAATTTCCTGTCCAGAGGAAGCCTAGATGAGAATCTTCATGGTAACAAGAGGGATGGCAATGGATTTGGTTGGCAAGAGAGGCATAAGGTGGCAGTAGGCGTCGCTGAGGCACTGGACTACTTACACAATGGCTGTAATGAACCTGTGGTCCATAGGGATGTGAAATCATCAAATATACTTCTTTCCGATGATTTTCAGCCACAGCTCTCTGATTTTGGACTTGCTGGTTGGGCATCCTGTTCCGCTCAAGTTACCTGTACCGATGTGGCAGGAACCTTTGGATACCTTGCACCTGAATACTTCATGCATGGCAAAGTGAGTGACAAAGTTGATGTCTACGCTTTTGGTGTGGTACTTTTGGAGCTTTTATCAGGTAGAAAGCCTATTGACAATGAAAATCCAAAGGGTCAGGAGAGCCTGGTGATGTGGGCAGCACCAATCTTGAAGAGCGGGAAGCTTTCCCAATTGCTTGATTCAAGTTTAGGAAGTGATTATGATCCCTGTCTGATTGAAAGAATGGTTTTAGCCGCCAATCTTTGCATCAGACGGGCACCTAAACTCAGACCTCAAATGAGCCTTATCTTGAAGCTTCTTATTGGTGACAAAGATGTGATGAATTGGGCAAAGCAGGAAGTTATTGAATTGGAAGAAGCTGATGCCTTGGATGGAGAACTGTTTCCCGCTAACATCCAGTCTCATCTAAATCTGGCATTACTCGATTTAGAGGACGACTCAATTTCCGTCAGTAGCACACCGAGAAGTGTATCGATAGAGGAGTATCTGCAAGGAAGGTGGAGCCGCTCATCGAGCTTTGATTAA 2061 0.4357 MKLKLIGDRKEGDGDYISDDDRSGSGRTVLVGVKLDSYSRELLTWALVKVARPGDLVIALHVLDAIKECAASVISLVKTFDSVLSVYEGFCNLKQVDLKLKVIRGSSPREIIVQEAKAHGVATVIVGASRTHHRIRSNASVAKYCSRKLPKCSSVYAVDSSKIVFCREATKTLKSNQGLGYSRRSLSDSTKKIRESCERCATNSVSPVREVLEKEISLALVPVQRVVAKESKHGWSILRQVLFPDKHMEKSFLGKFSLSNWVRRQSTWHPSAAVFPDQKQICSDSNDGSTLNGENGAIVPYGSNADDSFKSLPKELLDLREKYSFKCIIYNYGDLASATANFSDERFVGKGGSSRVFKGYIPHGKEVAVKILKRSEDVLKEFVQEIEIITTLQHKNVVSLSGFCCENDKLLLVYNFLSRGSLDENLHGNKRDGNGFGWQERHKVAVGVAEALDYLHNGCNEPVVHRDVKSSNILLSDDFQPQLSDFGLAGWASCSAQVTCTDVAGTFGYLAPEYFMHGKVSDKVDVYAFGVVLLELLSGRKPIDNENPKGQESLVMWAAPILKSGKLSQLLDSSLGSDYDPCLIERMVLAANLCIRRAPKLRPQMSLILKLLIGDKDVMNWAKQEVIELEEADALDGELFPANIQSHLNLALLDLEDDSISVSSTPRSVSIEEYLQGRWSRSSSFD* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02071 686 Gene3D HUPs 26 158 IPR014729 -
Pte1g02071 686 CDD USP_Like 28 152 - -
Pte1g02071 686 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 26 159 - -
Pte1g02071 686 Pfam Protein kinase domain 343 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02071 686 FunFam Putative receptor-like serine/threonine-protein kinase 417 628 - -
Pte1g02071 686 SUPERFAMILY Protein kinase-like (PK-like) 324 612 IPR011009 -
Pte1g02071 686 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 311 416 - -
Pte1g02071 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Pte1g02071 686 Gene3D Transferase(Phosphotransferase) domain 1 417 629 - -
Pte1g02071 686 SMART serkin_6 342 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02071 686 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 150 - -
Pte1g02071 686 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Pte1g02071 686 Gene3D Phosphorylase Kinase; domain 1 310 416 - -
Pte1g02071 686 Pfam Universal stress protein family 27 151 IPR006016 -
Pte1g02071 686 PANTHER OS08G0249100 PROTEIN 79 623 IPR046958 -
Pte1g02071 686 ProSiteProfiles Protein kinase domain profile. 342 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02071 Pte-Chr1 41874484 41878604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02071 329 608 Trihelix Transcription Factor Family AT1G68690 43.357 1.58e-69 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pte1g02071 Pkinase 1.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02071 - - zju:107425669 809.29