Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02064 ATGGCAGCGGAGTTAGACTTTCCGCCTGGTTTCAGATTTCACCCCACAGATGAGGAGTTGGTCAATCATTATTTGTGTAGAAAATGCGCCTCACAACCTTTAGCTGTTCCTATAATCAGAGAGATCGATTTGTATAAGTACGATCCATGGCAGCTACCAGAATTGGCTCTGTACGGTGAGAAGGAATGGTACTTCTTTTCTCCAAGGGATAGAAAATATCCAAACGGGTCAAGACCGAACCGGGCGGCTGGTGCCGGGTACTGGAAGGCAACTGGAGCAGACAAACCAATTGGGAAGCCAAAGGCACTTGGGATCAAAAAGGCACTTGTATTCTATGCTGGAAAAGCCCCTACCGGAATCAAGACAAACTGGATCATGCATGAATATCGCCTTGCAAATGTAGATAGATCTGCCGGCAAGAAAAATAATTTAAGGCTTGATGATTGGGTACTGTGTCGAATTTACAATAAGAAAGGTAGCCTAGAGAAATATGACAATGACACCATGGATCAGAAAATGGCAGAGTTAGCTGAATTCCACGAGACAAAACCAGACATCAAGATGTTCGGTCAGAACGTGAACATGGTACCGATGCAAACATCAAAGCTACAGCCAATGTTGACGAATTCGCATTTGCACACGGATATTTCAGATTCAATACCAAAGTTGCACACTGATTCGAGCAGCTCCGAGCTCGTGCACTCACCTGATATCACGTACGATAAGGAGGTCCAGAGCGAACCAAAGTGGAAAGAGCTAGAGGCAGCATTTGATTTACAGTTCAACTACATGGACAATGATTTCTTCGATGTTCCTTTCACCCCCCAGGCTCATTACGATGTGAGCCAGCTCTCACCATTACAGGATATGTTTATGTATCTACACAAGCCATTTTGA 897 0.4448 MAAELDFPPGFRFHPTDEELVNHYLCRKCASQPLAVPIIREIDLYKYDPWQLPELALYGEKEWYFFSPRDRKYPNGSRPNRAAGAGYWKATGADKPIGKPKALGIKKALVFYAGKAPTGIKTNWIMHEYRLANVDRSAGKKNNLRLDDWVLCRIYNKKGSLEKYDNDTMDQKMAELAEFHETKPDIKMFGQNVNMVPMQTSKLQPMLTNSHLHTDISDSIPKLHTDSSSSELVHSPDITYDKEVQSEPKWKELEAAFDLQFNYMDNDFFDVPFTPQAHYDVSQLSPLQDMFMYLHKPF* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02064 298 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Pte1g02064 298 FunFam NAC transcription factor 16 161 - -
Pte1g02064 298 PANTHER NAC TRANSCRIPTION FACTOR 56 7 206 - -
Pte1g02064 298 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Pte1g02064 298 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Pte1g02064 298 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02064 Pte-Chr1 41795313 41797688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02064 1 299 NAC Transcription Factor Family AT1G01720 61.392 1.03e-122 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte1g02064 NAM 1.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02064 - - qsa:O6P43_023410 459.144