Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02061 ATGTCCGAACGGCCGAGGAGTGTTGTCTGCTTGACACAGGCCATCCAGAATGACAATTTCCAGCGTGAAGGCTTCCATAAATTCTTCGACTGTTGGCTGGTTGAACAGGGTGAACATCTCAAGAATCTAATCGCTGCATCTGAGGGATACCAGACATGTGCTGGCGCCACCCCTAATCCTGTACATGGACCAATTCGAGATCAGGCTGTTGATGATTCAGTTAGTTTGCGTCCAATCATCAAGACAGTGGTGGAGCATTACGAGCAGTACTACAGGGCCAAGTCAACGTGGGCCAAGCATGATGCCGCAGGAATTTTGTCCCCAGAATGGAGAAGCTCATTGGAGGATGCTTTTGCCTGGATTGGGGGATGGCGTCCTTGTGTGGCAATACATTTGCTCTACTCCAAGTCTGGCTTGCAACTTGAGGCCAAACTGACTGAGCTGGTTCAAGGGCTGACTACATGGGACTTGGGAGATCTCTCTTCAGACCAACTTGCCCAAGTGGATGGCTTGCAGAAAACGACCATTACACAAGAGAGGCAAATCACAGAGACGATGGCAACGCTGCAGCAGACAGTGGCAGATTCATCCATGGTGGAGTTGTCCCATGCTCTTACTCAGATAGCAAGAGGAGCTGGTGAATCCGACACTAGAAATGGAGTTGAGGCCAGAATTGAGGAAACACTAACATCAAAGGAAGATGGTCTGGAAGAGGTACTGCAAAAGGCTGATGACTTGAGGCTTACAACACTGAAGGCAATTATCCATATTCTGACTCCAATCCAGGCTGTCCACTTCTTGATTGCTGCAGCAGAGCTCCACCTGCAGCTTCATGAGTGGGGGAAAAACAGAGAAGCAAGGCATGGACAACCGGATGAGCAGATAGTTTCATGCTAG 897 0.4939 MSERPRSVVCLTQAIQNDNFQREGFHKFFDCWLVEQGEHLKNLIAASEGYQTCAGATPNPVHGPIRDQAVDDSVSLRPIIKTVVEHYEQYYRAKSTWAKHDAAGILSPEWRSSLEDAFAWIGGWRPCVAIHLLYSKSGLQLEAKLTELVQGLTTWDLGDLSSDQLAQVDGLQKTTITQERQITETMATLQQTVADSSMVELSHALTQIARGAGESDTRNGVEARIEETLTSKEDGLEEVLQKADDLRLTTLKAIIHILTPIQAVHFLIAAAELHLQLHEWGKNREARHGQPDEQIVSC* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02061 298 ProSiteProfiles DOG1 domain profile. 22 287 IPR025422 GO:0006351|GO:0043565
Pte1g02061 298 Pfam Seed dormancy control 70 135 IPR025422 GO:0006351|GO:0043565
Pte1g02061 298 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 24 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02061 Pte-Chr1 41778375 41779665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02061 61 291 Calmodulin-binding Proteins AT5G65210 28.571 1.56e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02061 - - rvl:131303584 323.939