Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02060 ATGACAGAAACTGGAAGTGCTGCATGCCTGACACAGGCCATTGAGAACGACAATTACCAGCGCGAAAGCTTTCACAAATTCTTCGAGTGTTGGCTTGTTGAACAAAGCCAACATCTAAAGGACCTCACAGCTGCCTGTGAGGAATACCAAGCAACAACAGCTCCCACCCCTCATGAAGCTGGGGATGAGACTGTTTTGCGATCGATCATCAAGACCGTGATTGATCATTACGAGCAGTACTATAGGGCCAAGTCAACGTGGGCTAAGCATGATGTTGCAGGAATGTTCTCCCCAGCATGGCGGAGCGCATTGGAGGATGCGTTTGCCTGGATTGGTGGATGGCGTCCAAGTGTGGCAATCCAATTACTCTACTCCAAGTCCGGATTGCAACTCGAGGGAAAGCTGACTGAGTTGCTTCGTGGGCTACGTTCAAATGACTTGGGGGATCTCTCTGCAGACCAACTTACCCAAGTGGACGAGTTGCACAGAAGCATCATCAGACAAGAGAGGAAAATAACAGAGATGATGGCAACCCAGCAGGAGACAGTGGCAGACTCATCTATGGTGGAGTTATCACATGTGGCGACTGAAATGGAAAGAGGAGCTGGTGAATCAGGAGAAGGCACTAGTGATAGATATGATGCCAGGATAGAGGAAGCACTGACATCAAAGGAGGATGGTCTGGAGGAGATGCTGCAGAGGGCTGATGACTTGAGGCTCATGACATTGAAAACAGTGGTTGATATTCTGACTCCGTTTCAGGCTGTTCACTTCTTGATTGCTGCGGCAGAGCTTCACCTTCGGATTCACGAATGGGGAAAAAGAAGAGATCAAGCTAGGCACGAACGACAGAATTAA 858 0.4895 MTETGSAACLTQAIENDNYQRESFHKFFECWLVEQSQHLKDLTAACEEYQATTAPTPHEAGDETVLRSIIKTVIDHYEQYYRAKSTWAKHDVAGMFSPAWRSALEDAFAWIGGWRPSVAIQLLYSKSGLQLEGKLTELLRGLRSNDLGDLSADQLTQVDELHRSIIRQERKITEMMATQQETVADSSMVELSHVATEMERGAGESGEGTSDRYDARIEEALTSKEDGLEEMLQRADDLRLMTLKTVVDILTPFQAVHFLIAAAELHLRIHEWGKRRDQARHERQN* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02060 285 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 22 283 - -
Pte1g02060 285 Pfam Seed dormancy control 50 125 IPR025422 GO:0006351|GO:0043565
Pte1g02060 285 ProSiteProfiles DOG1 domain profile. 21 279 IPR025422 GO:0006351|GO:0043565
Pte1g02060 285 Coils Coil 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02060 Pte-Chr1 41776134 41776991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02060 31 275 bZIP Transcription Factor Family AT5G06950 26.587 1.27e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02060 - - rvl:131303584 333.954