Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02048 ATGTTGGAAACCAAACATACCACCAATGACACTGGAATGCCACGGTGGGGTGTTCGTCACCGGCTGACATTTGTTGGGAGGAATAAAGCAAAAAGTGACCAACATCCTTCCTACATCGTTAAGCAAGAGGATTTAGAAGATGAGGTAGAAGCAGAGAATCCTCTCAAAGTTGAGCCTTTGATTATACCTGAATTTAAGAGAAAGCGTGACAGCCGTTGCCGACCCCGACTGATGAAAGCTGCAGTAGGTGTCAAAATGGAACCAAAAATTGGCAGCAAAAACAGAAAGAAACATGCGGCTCCAATTGATAGATGGTCAGCTGAGAGGTATATGCTGGCTGAGAAGAGTATGTTGGAGATCCTTAAGGCTGAAGGAGCAACTTTTTCTAAGCCAATTTCACGTCCAGAGCTGAGAAAGGCAGCTCGTACACGAATAGGTGATACTGGGTTGTTGGATCATTTATTGAAGCACATTGATGGAAAAGTGGCACCAGGTAGCACTGAAAGGTTCAAAAGATGTTTTAATACGCACGGCATTATGGAATATTGGCTGGAGAGTGCCGAGTTAGATAGCATTCGCCAAGAGGCTGGTGTGCGGGATCCTTACTGGACTCCACCAATTACATTTCCCCTCGGTGGTGGTACCTGTGGTGGTACTGATTCATTGGGAGAACTGGAGTTGCTGAAGGCTGAAATGGAAAAAATGAAGAGTGATATGCAGTGCCTTATGTCCAAGAAACAAGAAGATGAAACTAAATTCATGAGGGGGATCCATGAGGAACTGCTGAAGTGGAAGTCTAATACTGAGCAACAGATGGCTGAAGTTGTAACTTCCTTGAAGGGATTGCACGGAATATATGATGAGCTGTTAAGATGGAAAACTAAAGTTGACCAGCAGCTTGTAGAAATTACAAATACATTGAATGGGCTGCTTGCACATAAAGATCAGACTGCCCTTGGTCCTCCAATAGAAGAGTGGGAAGACTGGTTTGACAGCTCCAATCTGGATAATATTCAAGGAGATGGACTTGTTCCTTTGATTCCTGTTGAGCAGAATGCTATGGTTCTAGATCCCATTTCAGCCCCTCCATCGCAATTCAATAATGGTCATAACCTTTCTCAAGCACCTATTTGTGCTAAAGAACTGGAGCAACTAAAGGAAGAAGTGGCCAACATGAAAAGGAACTTACTGGAACTGGTACCGAGGAAGCAAGAGGAAGACCAAGCCAATGTCACTCCTGATTCTTCTGTAACAGTCAGTTCAAAGTCCGACTTTGACAACTCAGTAATCTTACTTCAGGAAATGTTGATGGAGTTATTTAAATGGAAAGATAAAACTGAGCAACGGCTAGTTGAGGTATCAAATACTCTTTATGGGTTGCTCGGGCTAAAGTAG 1395 0.4344 MLETKHTTNDTGMPRWGVRHRLTFVGRNKAKSDQHPSYIVKQEDLEDEVEAENPLKVEPLIIPEFKRKRDSRCRPRLMKAAVGVKMEPKIGSKNRKKHAAPIDRWSAERYMLAEKSMLEILKAEGATFSKPISRPELRKAARTRIGDTGLLDHLLKHIDGKVAPGSTERFKRCFNTHGIMEYWLESAELDSIRQEAGVRDPYWTPPITFPLGGGTCGGTDSLGELELLKAEMEKMKSDMQCLMSKKQEDETKFMRGIHEELLKWKSNTEQQMAEVVTSLKGLHGIYDELLRWKTKVDQQLVEITNTLNGLLAHKDQTALGPPIEEWEDWFDSSNLDNIQGDGLVPLIPVEQNAMVLDPISAPPSQFNNGHNLSQAPICAKELEQLKEEVANMKRNLLELVPRKQEEDQANVTPDSSVTVSSKSDFDNSVILLQEMLMELFKWKDKTEQRLVEVSNTLYGLLGLK* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02048 464 Coils Coil 375 399 - -
Pte1g02048 464 PANTHER PROTEIN DYAD 351 459 IPR044221 GO:0007131|GO:0051177|GO:0051321
Pte1g02048 464 Coils Coil 225 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02048 Pte-Chr1 41662184 41667398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02048 94 185 PHD Transcription Factor Family AT5G22260 39.175 6.23e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02048 - - qsa:O6P43_030286 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02048 1 41662184 41667398 Pte1g02048 1 41662184 41667398 RCT