Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02047 ATGGAGTGCAATCAACATGGAACATATCACTCACAGGAATACATCCTTCCTCCCAATCCGCATCACACTGTATTCCTTTGCCTAATATTTTTCTCAATCTACAGTCTACACGAATCTGGAATGAGGAAGGCTAAAGAAACTGATCAGTACAAGAGGATAGCACCAAAAGGACACTTTGTTGTTTATGTGGGGAAAGAACAGAAACGATACATTGTACCCTTGTCGTATTTGAGGAATGCGACTTTCCTGCAACTTCTGGAGATTGCTGCTGAGGAATATGACTTTGAGTACAGCCAGCAAAGCATACACCTGCCCTGCAACGTATCATTCTTCGAAACAATCATCGATTTCTTGGCTAGATCTTCATAA 369 0.4146 MECNQHGTYHSQEYILPPNPHHTVFLCLIFFSIYSLHESGMRKAKETDQYKRIAPKGHFVVYVGKEQKRYIVPLSYLRNATFLQLLEIAAEEYDFEYSQQSIHLPCNVSFFETIIDFLARSS* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02047 122 Pfam Auxin responsive protein 45 118 IPR003676 GO:0009733
Pte1g02047 122 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 46 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02047 Pte-Chr1 41651352 41651818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02047 55 118 Calmodulin-binding Proteins AT4G31320 43.750 7.01e-12 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02047 K14488 - nnu:104593708 82.0333