Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02033 ATGGATGATAGCCGCCAACATGAAAATCTGAGACATAAGATGGAGTATTACCGAGGATCACATGCTCCGTGGAATATGTCGGCACAGCATCCGGGAAAGGAATCAAATGTTGTTGTTATGAACAAGAAGATTAAGTCCATTCTTGCAGAGATGGAAGGAGTTATTCAAGAACGAAATGTCGCACTGTCTGAGAAAAATGAAGCCCTGGCTGCTCGAGACGAGGCTTTACGTCAGCGTGATGAGGCAATTGCTCAGCGAGATAATGCATTGATGGAACGAGATAATGCCCTTGCTGCCCTGCAAATACGGGATGGTGGTATGAACTTCCATTTAAGTGGTGGACAACGTGGATCAAAACGCACGCACCATTCTGCAAGCCATCTTGGGAGCATTGCAGAAGCTCCATATAGCTCAAAGGACGTGCCAATAACTGATGCTTTCCCAGTTACTGTTATTTCTTCTGAAGCTGTCAAGTCTCATCAAGCAAAGCGGACAAAGGAGAACAAAGCAATGTCCTCAAAGTCAGGTTATCAACCATACAAAGGAAAGAAAGTAGGTGAGGATCTGAATCAGAAGGCTTCTTCAGGGATGAAGATTAAGACTGAATGGGATAGTCATAATGTTGGCTTAAACCTGATAGCATTTGATGAGTCTACCATGCCTGCTCCAGCTTGTTCATGCACAGGAGTACTACGGCAGTGCTACAAGTGGGGAAATGGTGGCTGGCAGTCATCTTATTGTACCACGACACTATCAATATACCCACTACCACAGCTGCCAAACAAACGCCATGCCCGTATTGGTGGCCGAAAAATGAGTGGGAGTGTCTTTACTAGATTGCTTAGTCGTTTGGCAGCAGAAGGCCATGATCTGGCCATACCCGTGGATCTCAAAGAGTACTGGGCAAGACATGGTACCAATCGCTACATTACCATTAAGTAG 942 0.4554 MDDSRQHENLRHKMEYYRGSHAPWNMSAQHPGKESNVVVMNKKIKSILAEMEGVIQERNVALSEKNEALAARDEALRQRDEAIAQRDNALMERDNALAALQIRDGGMNFHLSGGQRGSKRTHHSASHLGSIAEAPYSSKDVPITDAFPVTVISSEAVKSHQAKRTKENKAMSSKSGYQPYKGKKVGEDLNQKASSGMKIKTEWDSHNVGLNLIAFDESTMPAPACSCTGVLRQCYKWGNGGWQSSYCTTTLSIYPLPQLPNKRHARIGGRKMSGSVFTRLLSRLAAEGHDLAIPVDLKEYWARHGTNRYITIK* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02033 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Pte1g02033 313 MobiDBLite consensus disorder prediction 157 184 - -
Pte1g02033 313 SMART GAGA_bind_2 1 313 IPR010409 -
Pte1g02033 313 Coils Coil 65 92 - -
Pte1g02033 313 PANTHER - 11 313 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02033 Pte-Chr1 41460971 41463688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02033 1 314 BBR or BPC Transcription factor family AT2G21240 57.098 4.05e-122 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pte1g02033 GAGA_bind 5.4e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02033 - - qsu:112013863 500.745