Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02027 ATGGATATGGATCAGAAGGAAACGTGTAAGAAGAGTCTGTTTCTGAAGGCATGGAAGCAGTGTCAATCTATTGGATCCTCACGTGGCGGTAGCAGAAAAGAGTCATGGACAAGAAGGGAAGCTGTTCACCTATTTACAAAGAGCAAATCATGGCATTGCCAAACAAAAACATTAGAGGAAGATTACAGAAAGAAAAAGGTCGCCCCCGCTGGTTGTTTTTCTGTCTATGTCGGACCCCAGAAGCAAAGGTTTGTGGTCAAGACTCGGTTAGTCAACCATCCACTGTTCAAGATGTTGCTGGAGGATGCTGAACTGGAATATGGATTTGCAAGTCAGGGCCCTCTATCGCTTCCTTGTGACGTTGACTTGTTCTACAAAGTGTTAGCAGAGATGGATAGTGAGCATGAGATGGATGGCAACCTGGGCAAAAGTTACAGTCCCTTTGGGTTGTGTAGTCCTATTCGTTATCGTTCTGGCGTAAAACATACTGAAGGGTACAAGCTTCTCCATCAGGGTCGCTCAAGATAA 528 0.4508 MDMDQKETCKKSLFLKAWKQCQSIGSSRGGSRKESWTRREAVHLFTKSKSWHCQTKTLEEDYRKKKVAPAGCFSVYVGPQKQRFVVKTRLVNHPLFKMLLEDAELEYGFASQGPLSLPCDVDLFYKVLAEMDSEHEMDGNLGKSYSPFGLCSPIRYRSGVKHTEGYKLLHQGRSR* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02027 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 52 127 IPR003676 GO:0009733
Pte1g02027 175 Pfam Auxin responsive protein 49 129 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02027 Pte-Chr1 41380676 41381320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02027 68 129 Calmodulin-binding Proteins AT4G34750 48.387 1.25e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02027 K14488 - tcc:18605153 178.718