Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02014 ATGGCCAACAACCAACAAGCCCAGTCTTCCTCGTACCCACCTCAACCCCAAACAGCTGCTGCTCCTCCATTTCACCACCCCCTCCAGCAGCAACAGCAACAGCTCCAGATGTTCTGGACTTACCAGCGTCAAGAAATTGAACACGTCAATGATTTCAAGAACCACCAGCTCCCATTGGCCCGCATCAAGAAGATCATGAAGGCCGATGAGGACGTCCGCATGATATCTGCTGAGGCCCCCATTTTGTTTGCCAAGGCCTGCGAGCTGTTCATCCTTGAGCTAACTATTCGATCCTGGCTTCACGCTGAAGAGAACAAGCGGAGGACACTTCAGAAGAACGACATAGCCGCCGCCATCACCAGGACTGAGATCTTCGATTTCCTCGTCGATATTGTCCCCAGGGACGAGATCAAAGACGAAGCTGCACTTGGCGCCATGGTCGGCGCCACTGCTAACGGGGTCCCTTACTACTACCCGCCAATGGGACAACCCGCCGGCCCTCCCCCTCCTGGTATGATAATCGGTCGCCCCGCTGTGGACCCCACCTCCATGTACGCGCAGCCTCCCTCTCAGGCTTGGCAGTCGGTTTGGCAGGCCAACGCTGAGGAATGTAGCGTTGGTTCCTACCCCGGCGGAGGGAGCACCAGCCAGAGCAACCTTGATGGGCAGAGGTATCAGCTTTTTGTTCCTTTACCTTCCAGTTAA 705 0.5589 MANNQQAQSSSYPPQPQTAAAPPFHHPLQQQQQQLQMFWTYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTEIFDFLVDIVPRDEIKDEAALGAMVGATANGVPYYYPPMGQPAGPPPPGMIIGRPAVDPTSMYAQPPSQAWQSVWQANAEECSVGSYPGGGSTSQSNLDGQRYQLFVPLPSS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02014 234 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 18 152 - -
Pte1g02014 234 MobiDBLite consensus disorder prediction 1 15 - -
Pte1g02014 234 Pfam Core histone H2A/H2B/H3/H4 14 119 IPR007125 GO:0003677
Pte1g02014 234 FunFam Nuclear transcription factor Y subunit gamma 25 134 - -
Pte1g02014 234 Gene3D Histone, subunit A 24 134 IPR009072 GO:0046982
Pte1g02014 234 MobiDBLite consensus disorder prediction 1 23 - -
Pte1g02014 234 SUPERFAMILY Histone-fold 7 128 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02014 Pte-Chr1 41290510 41291904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02014 24 223 CCAAT-HAP5 Transcription Factor Family AT3G48590 81.773 8.81e-106 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pte1g02014 Histone 2.5e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02014 - - pcin:129320575 306.99