Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02009 ATGAGAACTAAAACTAATATTCAAATGTTGGTCGATAATGTGTCAAGTGTTGCGCTACTACTCCGTATTAGGCCTGTTATTTTTCAATTTGGTCCTGGCCAGTTCAAAAACGCTATGGAGGATGTGAAGAAAATGGGGTTGGATCCTTTGAAAAGTACCTTTGTTTTGGCACTGATTGCTTTAAAAGGACTAAGCAAAGTCAGGTGGGATTGGAAGAAGGAACTATATAAGAAGTTGGACTGGTCTGAAGAAACAATGCTCACTGCATTTGTCAGGGCACCTCAATTGATGTTAGTTTCTGAAGACAAAATTAACGCAATGGCTAATTTCTTTCTAAACGAAGTGGGTTGGAATTCTGCAACACTTGCCAGAAGACCATATATTTTTCCTATGAGTTTGGAGAGAAGAGTTAAACCACAGAACTCAATGGTATTGTTCCTCTCATCGAAAGGTTTGATTGACAAGAAGGCTAGCTTGATAACCCCTCTCTATGTCACTTAA 501 0.3892 MRTKTNIQMLVDNVSSVALLLRIRPVIFQFGPGQFKNAMEDVKKMGLDPLKSTFVLALIALKGLSKVRWDWKKELYKKLDWSEETMLTAFVRAPQLMLVSEDKINAMANFFLNEVGWNSATLARRPYIFPMSLERRVKPQNSMVLFLSSKGLIDKKASLITPLYVT* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02009 166 Pfam mTERF 16 163 IPR003690 GO:0003690|GO:0006355
Pte1g02009 166 Gene3D Transcription termination factor 3, mitochondrial 3 166 IPR038538 -
Pte1g02009 166 PANTHER CGI-12 PROTEIN-RELATED 4 161 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02009 Pte-Chr1 41240148 41240648 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte1g02009 mTERF 5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02009 K15031 - vvi:100240766 134.42