Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02004 ATGGCAGCCACATTCTATGACGTTAACTCTGCTTCTGGGTTGAAGAAGCTTGATGACTACCTGCTTACTCGCAGTTATATAACTGGATATCAAGCGTCAAAGGATGATATCACAGTTTATTCAGCTTTGTCAAAAGCTCCATCAGCTGAATACGTCAACGTAAGCCGTTGGTACAAGCACATCAATGCACTGTTGAGGGTTTCTGGTGTTTCGGGAGAAGGATCTGGAGTCACTGTGGAGGGCTCCGCTCCCTTAACAGAGGCAATTGCAACTCCACCCGCTGCTGACTCAAAGACTACAACAGCTGAAGATGATGATGATGACGACGTGGATTTGTTTGGTGAAGAAACTGAGGAGGAGAAGAAGGCTGCTGAAGAACGTGCTGCTGCCATCAAAGCATCTTCAAAGAAGAAGGAATCTGGGAAGTCATCTGTACTTTTGGATATCAAGCCATGGGATGATGAAACAGACATGAAAAAGCTTGAGGAAGCTGTGAGAAGTGTTGAGATGGAAGGGTTGCACTGGGGAGCATCCAAACTTGTACCTGTTGGATACGGTATCAAGAAACTGCAAATCATGCTTACCATAGTGGATGACTTGGTTTCTGTTGACTCTCTTATTGAGGAAAAACTCACAGTTGAGCCAATAAATGAGTATGTCCAGAGTTGTGACATTGTTGCCTTCAACAAAATATAG 696 0.4425 MAATFYDVNSASGLKKLDDYLLTRSYITGYQASKDDITVYSALSKAPSAEYVNVSRWYKHINALLRVSGVSGEGSGVTVEGSAPLTEAIATPPAADSKTTTAEDDDDDDVDLFGEETEEEKKAAEERAAAIKASSKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSVEMEGLHWGASKLVPVGYGIKKLQIMLTIVDDLVSVDSLIEEKLTVEPINEYVQSCDIVAFNKI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02004 231 FunFam Elongation factor 1-beta 1 like 136 231 - -
Pte1g02004 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pte1g02004 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Pte1g02004 231 CDD EF1B 145 231 IPR014038 GO:0003746|GO:0006414
Pte1g02004 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Pte1g02004 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Pte1g02004 231 FunFam Elongation factor 1-delta 1 3 78 - -
Pte1g02004 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Pte1g02004 231 Gene3D - 2 79 - -
Pte1g02004 231 MobiDBLite consensus disorder prediction 78 110 - -
Pte1g02004 231 Coils Coil 114 134 - -
Pte1g02004 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Pte1g02004 231 SUPERFAMILY GST C-terminal domain-like 9 68 IPR036282 -
Pte1g02004 231 Gene3D - 135 231 IPR014717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02004 Pte-Chr1 41211744 41214818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02004 3 232 Eukaryotic Initiation Factors Gene Family AT2G18110 82.684 5.08e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02004 K03232 - cave:132173833 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02004 1 41211744 41214818 Pte1g02004 1 41211744 41214818 RCT