Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02003 ATGTATAATGATCTGGGAATTGAGCAGGAGTATGTGGAGGTACAGCATCTGGGAAGACCACGTTTGACAGAAGAGGAATTGAAGAACGTTCATGAGTATAATTTTGATCATCCCGATGCATTTGATACAGAACAACTTTTGGAGTGCATGGGCAAGCTCAAGTGTGGACAGTCCGTTCATGTTCCAGTATATGATTTTAAGACCCATCACCGTTCTTCTGACAGTTTCAGACAGGTTAATGCATCTGATGTAATCATTTTGGAGGGTATACTGGTTTTTCATGATCAATGTGTACGCGATTTGATGAATATAAAAATTTTTGTTGATGAAGATACGGATGTCAGGCTTGTCCGCAGAATAAGTCGTGACACTGTTCACAGGGGCAGAGATATCGATTCTGTTCTGCAACAGTATGCGAAGTTTGTCAAGCCTGCCTTCGACGATTTCATTCTTCCGTCGAAAAAGCATGCTGATGTTATTGTACCTCGTGGAGGTGACAACCATGTCGCAGTTGATTTGATAGTGCAACATATACGCACAAAGCTTGGTCAACATAACCTTTGTAAGATATATGTAGGTCTCAACATTATTCCATCTACGTTTCAGATAAGGGGCATGCATACTTTAATTCGTGATAGGGAAACATCAAAGGATGACTTCGTTTTCTATTCAGATCGTTTAATACGTCTGGTAGTAGAACACGGAATGGGCTACCTGCCATTTATAGAGAAGCAGGTTATGACTCCTACAGGATCACTCTACACTGGAGTTGAGTTTTGTAATAAACTCTGCGGAGTGTCGATTATTCGAAGTGGTGAAAGCATGGAAAATGCACTCCGTGCCTGCTGCAAAGGAATCAAAATAGGGAAACTCCTCATCCATCGACATGGGGACAATGGGACCGAGCTTATATATGAGAAGCTTCCAGAAGATATTTCAGAACGACACGTCCTGCTTATGGATCCAATTCTCGCAACAGGCAACTCTGCAAATAAAGCAATTGAGTTACTCCTAAAGAAGGGAGTGCCCGAATCACACATAATATTTCTCAACCTCATCTCTGCTCCTGAGGGATTAAATTCAGTCTACAAACGTTTCCCACATCTCAAAATCGTCACTTCAGAGATCGATGTTGGATTAAATGATGGACTTCGTGTCATACCAGGGATGGGCGAGTTTGGCGACCGTTATTTTGGCACAGGATAA 1206 0.4196 MYNDLGIEQEYVEVQHLGRPRLTEEELKNVHEYNFDHPDAFDTEQLLECMGKLKCGQSVHVPVYDFKTHHRSSDSFRQVNASDVIILEGILVFHDQCVRDLMNIKIFVDEDTDVRLVRRISRDTVHRGRDIDSVLQQYAKFVKPAFDDFILPSKKHADVIVPRGGDNHVAVDLIVQHIRTKLGQHNLCKIYVGLNIIPSTFQIRGMHTLIRDRETSKDDFVFYSDRLIRLVVEHGMGYLPFIEKQVMTPTGSLYTGVEFCNKLCGVSIIRSGESMENALRACCKGIKIGKLLIHRHGDNGTELIYEKLPEDISERHVLLMDPILATGNSANKAIELLLKKGVPESHIIFLNLISAPEGLNSVYKRFPHLKIVTSEIDVGLNDGLRVIPGMGEFGDRYFGTG* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02003 401 FunFam Uridine kinase 185 400 - -
Pte1g02003 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 174 IPR027417 -
Pte1g02003 401 CDD UMPK 22 181 IPR000764 -
Pte1g02003 401 PRINTS Uridine kinase signature 149 162 - -
Pte1g02003 401 PRINTS Uridine kinase signature 127 138 - -
Pte1g02003 401 PRINTS Uridine kinase signature 56 71 - -
Pte1g02003 401 PRINTS Uridine kinase signature 113 123 - -
Pte1g02003 401 CDD PRTases_typeI 261 373 IPR000836 -
Pte1g02003 401 PANTHER URIDINE KINASE 21 311 - -
Pte1g02003 401 Pfam Uracil phosphoribosyltransferase 198 400 - -
Pte1g02003 401 Pfam Phosphoribulokinase / Uridine kinase family 26 169 IPR006083 GO:0005524|GO:0016301
Pte1g02003 401 Gene3D - 4 184 IPR027417 -
Pte1g02003 401 SUPERFAMILY PRTase-like 193 400 IPR029057 -
Pte1g02003 401 Gene3D - 185 400 IPR029057 -
Pte1g02003 401 FunFam Uridine kinase 12 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02003 Pte-Chr1 41199177 41202086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02003 22 400 PRT Gene Family AT5G40870 80.211 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02003 K00876 - egt:105964240 657.136