Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01998 ATGGCCACTCAGATTGACACATCGAGCGGCTTTTGCCCACAAACAAAAACCTACTACAGTCTCAGACCAGAGGTTCCTCTCCCACCTCTCACTCAACCTCTCTCCCTGACGGACTATGTACTAGCTCTCATTCCATCCTCTGCTTCTTCCGCCACTGTTCTCATTGATTCCTCTGTAGACCGCCAGCTGTCTTATTCGCTCTTCCTTCAACAAATTCAGACACTTTCTTCCTCACTGCAGATTCTCTTTCCTTCTCTTTCAAAAGGCGATGTCGCTTTCATTCTATCCCCTGCTTCTCTTCACCTCCCAGTTCTCTATTTCTCTCTCTTGTCTCTTGGCGTCACCATCTCTCCTGCCAATCCAAGTAGCTCTGACTCTGAAATTGCTCACCAGGTCCAGCTATGCAAACCCGCCGTTTCTTTTGCTACATCCTCCACTGCCAACAAAATTCCCAAAATTCCATTGGGTACCATTCTTCTTGATTCGCCTCTGTTTTTATCCATGATCGACGGAACAGGGGAATTCAGAAACGGAGTGCGTCGCAGAGTGGCCAAAGTGAGTCAGTCTGATTCGGCGGCCATACTTTACTCATCTGGCACCACAGGTCGAGTCAAGGGGGTGCTGTTGTCTCACCGTAATTTGATTGCTTTGATTGCTGGTTTTTACAATCTGAGGCATATGGATGCGACCGAGGAAGAGCCACACCCCGTGTCGCTCTTCACACTGCCTCTGTTTCACGTTTTCGGCTTTTTCATGCTAATTAGAGCAGTGTCGATGGCAGAGACCTTAGTTTTGATGCAAAGGTTCGATTTTGAGTCGATGTTGAAGGTTGTGGAGAAGTACAAGATAACATACATGCCGGTTTCGCCGCCGCTTGTGATTGCCCTGGCTAAGTCGGAGTTGACAAGCAAGTATGATCTGAGTTCACTAAGATTGCTTGGTTGTGGTGGTGCCCCGCTTGGTAAAGAGGTTGCAGAGGCTTTCAATGTTAAATTCCCGGATGTGGAAATTGTTCAGGGTTACGGTCTGACTGAGAGTGGAGGAGGTGCAACAAGGATGATCGGACCTGAGGAGGCTAAGCGCCATGGTTCTGTAGGCCGATTATCAGAAAACATGGAAGCCAAAATAGTTGATCCTGTAACTGGAGAGGCATTACCACCTGGCAAAAGAGGGGAGCTGTGGTTGCGAGGTCCTACAATGATGAAAGGTTATGTTGGCGATGAGAAGGCAACTGCAGAAACCTTAGATTCAGACGGATGGCTAAAAACTGGTGATCTTTGTTATTTTGACTCTGATGGATTCCTCTATATCGTGGACAGGCTAAAAGAGTTGATCAAATATAAAGCATATCAGGTTCCCCCAGCTGAGTTGGAACATTTACTTCAAGCCCATCCTGGAATTGCTGATGCTGCAGTAATCCCGTATCCTGATGATGATGCTGGTCAGATTCCAATGGCTTTTGTTGTAAGAAAACCTGGAATTAATGTGACTGCATCTGAGGTTATGGATTTCATTGCTAAGCAGGTATTATATGCTTCTTGGTGTCTCTCATTTTGTAGTCCTAGCTATATGATAGTTGATTTGGTACAGTTTACAAATAAATTGAAACAAGGAAATGGAGCATCTCAAACCATCTCTTTATCTGGTGGAGTTGTTGGATTAGTTAATGTCACTCTGGCACGAGTTAGAAGTGTCATCTCCGTGCTGTAA 1710 0.4585 MATQIDTSSGFCPQTKTYYSLRPEVPLPPLTQPLSLTDYVLALIPSSASSATVLIDSSVDRQLSYSLFLQQIQTLSSSLQILFPSLSKGDVAFILSPASLHLPVLYFSLLSLGVTISPANPSSSDSEIAHQVQLCKPAVSFATSSTANKIPKIPLGTILLDSPLFLSMIDGTGEFRNGVRRRVAKVSQSDSAAILYSSGTTGRVKGVLLSHRNLIALIAGFYNLRHMDATEEEPHPVSLFTLPLFHVFGFFMLIRAVSMAETLVLMQRFDFESMLKVVEKYKITYMPVSPPLVIALAKSELTSKYDLSSLRLLGCGGAPLGKEVAEAFNVKFPDVEIVQGYGLTESGGGATRMIGPEEAKRHGSVGRLSENMEAKIVDPVTGEALPPGKRGELWLRGPTMMKGYVGDEKATAETLDSDGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHLLQAHPGIADAAVIPYPDDDAGQIPMAFVVRKPGINVTASEVMDFIAKQVLYASWCLSFCSPSYMIVDLVQFTNKLKQGNGASQTISLSGGVVGLVNVTLARVRSVISVL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01998 569 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 533 - -
Pte1g01998 569 CDD 4CL 28 509 - -
Pte1g01998 569 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
Pte1g01998 569 Gene3D - 21 442 IPR042099 -
Pte1g01998 569 Pfam AMP-binding enzyme 50 447 IPR000873 -
Pte1g01998 569 Pfam AMP-binding enzyme C-terminal domain 456 508 IPR025110 -
Pte1g01998 569 Gene3D - 443 540 IPR045851 -
Pte1g01998 569 SUPERFAMILY Acetyl-CoA synthetase-like 33 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01998 Pte-Chr1 41175249 41179728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01998 5 509 Monolignol Biosynthesis Gene Families AT5G63380 60.271 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01998 K01904 - qsa:O6P43_022573 757.288