Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01993 ATGAATGACAGCAAAAGCGGGGTCGAAATTTCAGAGACTCGGAAAATGGACATGGAAATCGACGGTGCTTCTAAACCCAAAGAGGGAAAGTTGATTTTGGTAATGTTAGTTGGTGCACCAGGTAGTGGCAAGTCTACCTTCTGTGAACATGTGATGCGCTCTTCTGCCAGACCTTGGGTCCGAGTTTGTCAGGACACAATTGGTAATGGGAAGGCAGGAAATAAAGCGCTGTGCATTAAGGCTGTAGCCAATGCCTTGATGGATGGGAAAAGTGTGTTAATTGACAGATGCAATCTTGATAGAGAACAACGGTCTGAATTTCTGAAGCTTGAAGGACCAAATATTAATGTACATGCAGTGGTTCTAGATCTTCCTGCAAAGCTTTGTATCTCCCGATCTGTGAAGCGGACAGGACACGAAGGAAATTTACAGGGTGGAAGAGCGGCTGCAGTTGTGAATAGAATGCTACAGAAGAAAGAATTACCGAAAATAAGTGAAGGGTTTGATCGTATCACATTTTGTCAGGATGATAATGACATCAAAGCTGCAATCAATACATACAGTCAACTTGGTCCTTCTGATAATTTACCACATGGATGCTATGGCCAAAAGGCTTCAGATGCCAAGGTTCAAGTTGGTATAATGAAGTTCTTGAAGAAAGTGGAGGTTCCTGTAGATGCAGGTGCGCCATCTAAAGACAATGGTTTTCAGGAGTCTGTTTCTCCAAGAAAAGTTGAACAAGTTGATCCTTGCTCCAAAAATATGGTCACACATTCAGTTAATACTGACTTAGAGACAGAAAAAATAAAAGACTCGGCAGCTTGCTCTACTGCTTCTGGTTCTATTCCAGCTCCTCTTGATGATGTTCCCACTTTGGCATTTCCATCTATCTCAACATCAGATTTTCAATTCGACCATGAAAAAGCAGCTGGTATACTTCTTGAAAAGGTTGCAGAGTTCACCAAGATCATAGGAAATGCCAGACTTGCTTTAGTGGATTTAAGTCATAAGTCCAGGATTTTATCCTTAGTCAAAGCTAAAGCTGGAAAATATAAAATTGACAGTCAAAAGTTTTTCACACACGTCGGAGACATTACTCATCTCTATTCAGAGAGCGGTTTGCGCTGCAATGTAATAGCCAATGCTGCCAACTGGCGACTAAGACCAGGTGGAGGAGGTGTCAATGCTGCAATATATAATGCAGCAGGTCCAGAGCTAGAGGTAGCAACTAAAGAACGTGCTAAATCACTTTCTCCTGGAAATGCTGTTGTCGTCCCTCTGGCTCCAACTTCTGCTTTGTATAATAGAGAGGGAGTGACCCATGTGATTCACGTCCTTGGACCAAATATGAACCCACAACGTCCCAATTGTCTTGATAATGACTATAATAAAGGCTGTGAAATTCTCCGAGAGGCTTACAATTCTCTTTTTCAAGGTTTTGCATCCCTTGTCAGAAACCAAGCCAATGAAGTACATGGGCTTGCGAAAGAGATTGGGTCAAAGACTTTGAAGTTGCAATGCAATTCAGAGGGTAATACTCAAAACCAGCATTCAAGTAATGACCAAAAGAATAAGAGAAATGACATCCACGAATTTGATAGAAACAAAAAGTGGAGGGGTTCACAGAATGACTTTGATGATGATTCAACTGATTCCAGAGCTGCGAAGGAAAATTCGGGTGAGGCTAAGACTGAAGGAGGCACCAAAAGGACTTGGGGATCGTGGGCTCAAGCACTATTTCATATTGCTATGCATCCAGAACAACATTTGGAAGTTGTTCTGCATATGTCAGAGGATGTTGTTGTGCTGAATGATATGTACCCTAAGGCACAGAAGCATCTTCTGGTGTTGGCTCGTACTGAAGGCATTGATAGCCTGATGGATGTAGGGAAAGAGCACATTCCCTTATTGAGGACCATGCATGATGTGGGTTTGGCCTGGGCTGAGAAGTTCGTCCATGAAAATTCTTCATTGGCATTTCGACTTGGCTACCACTTGGTTCCATCCATGCGGCAGCTGCACCTACATGTTGTTAGTCAGGATTTTGATTCAAAACATCTAAAGAATAAGAAGCACTGGAACTCATTTAACACCAATTTCTTCCGAGATTCACTAGATGTAATAGATGAGATTGCAAATCATGGAAAAGCCATAATAAAGGACTCAGAGAAGGTCTTGTCAATGGAGTTAAGGTGCAATAGATGTCGAAGCGCACATCCAAACATACCTCGGTTGAAATCTCACATCAGTACATGTCAAGCCCCCTTCCCTGCTCCTCTTCTTCAGAATGGCCGTCTAGTTCGTGCACCGTAG 2313 0.4254 MNDSKSGVEISETRKMDMEIDGASKPKEGKLILVMLVGAPGSGKSTFCEHVMRSSARPWVRVCQDTIGNGKAGNKALCIKAVANALMDGKSVLIDRCNLDREQRSEFLKLEGPNINVHAVVLDLPAKLCISRSVKRTGHEGNLQGGRAAAVVNRMLQKKELPKISEGFDRITFCQDDNDIKAAINTYSQLGPSDNLPHGCYGQKASDAKVQVGIMKFLKKVEVPVDAGAPSKDNGFQESVSPRKVEQVDPCSKNMVTHSVNTDLETEKIKDSAACSTASGSIPAPLDDVPTLAFPSISTSDFQFDHEKAAGILLEKVAEFTKIIGNARLALVDLSHKSRILSLVKAKAGKYKIDSQKFFTHVGDITHLYSESGLRCNVIANAANWRLRPGGGGVNAAIYNAAGPELEVATKERAKSLSPGNAVVVPLAPTSALYNREGVTHVIHVLGPNMNPQRPNCLDNDYNKGCEILREAYNSLFQGFASLVRNQANEVHGLAKEIGSKTLKLQCNSEGNTQNQHSSNDQKNKRNDIHEFDRNKKWRGSQNDFDDDSTDSRAAKENSGEAKTEGGTKRTWGSWAQALFHIAMHPEQHLEVVLHMSEDVVVLNDMYPKAQKHLLVLARTEGIDSLMDVGKEHIPLLRTMHDVGLAWAEKFVHENSSLAFRLGYHLVPSMRQLHLHVVSQDFDSKHLKNKKHWNSFNTNFFRDSLDVIDEIANHGKAIIKDSEKVLSMELRCNRCRSAHPNIPRLKSHISTCQAPFPAPLLQNGRLVRAP* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01993 770 Pfam Macro domain 380 463 IPR002589 -
Pte1g01993 770 Gene3D - 574 754 IPR036265 -
Pte1g01993 770 FunFam Transcription factor bHLH140 21 189 - -
Pte1g01993 770 Pfam AAA domain 33 157 - -
Pte1g01993 770 SUPERFAMILY Macro domain-like 339 478 IPR043472 -
Pte1g01993 770 FunFam Transcription factor bHLH140 338 485 - -
Pte1g01993 770 FunFam aprataxin isoform X2 573 753 - -
Pte1g01993 770 PANTHER APRATAXIN-RELATED 292 752 - -
Pte1g01993 770 MobiDBLite consensus disorder prediction 508 569 - -
Pte1g01993 770 MobiDBLite consensus disorder prediction 521 564 - -
Pte1g01993 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 178 IPR027417 -
Pte1g01993 770 Gene3D - 12 189 IPR027417 -
Pte1g01993 770 ProSiteProfiles Macro domain profile. 345 611 IPR002589 -
Pte1g01993 770 ProSiteProfiles HIT domain profile. 579 687 IPR011146 GO:0003824
Pte1g01993 770 Gene3D Leucine Aminopeptidase, subunit E, domain 1 333 484 IPR043472 -
Pte1g01993 770 Pfam C2HE / C2H2 / C2HC zinc-binding finger 697 751 IPR032566 -
Pte1g01993 770 SUPERFAMILY HIT-like 571 736 IPR036265 -
Pte1g01993 770 SMART YBR022w_8 357 616 IPR002589 -
Pte1g01993 770 Pfam Scavenger mRNA decapping enzyme C-term binding 580 692 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01993 28 767 C2H2 Transcription Factor Family AT5G01310 57.027 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01993 K10863 - gmx:100786762 1025.39