Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01982 ATGAGAATATCAACTTCATTACGGAGATTTTCACGTCAGGAACGTTACGCCAGTGAAGTCAAAATCGGTGACTTGGGGCTGGCTGCCATTCTTTTCCAAGCCCGTTCAGCCCACAGTGTCATTGGTACCCCAGAGTTTATGGCTCCTGAGCTTTATGAAGAGGAATACAATGAGCTGGTTGATATCTACGCCTTCGGCATGTGCTTGCTGGAGTTAGTAACCTTTCAGTATCCGTATGCAGAATGTACTAATGCTGCTCAAATATACAAGAAAGTCACTTCTGGAATAAAGCCTGCATCTCTGGCAAAAGTGGAGGATCCTCAAGTTAAGGCATTCATAGAGAAGTGTATAGCAAATGTCTCGCAGCGTTTGTCAGCAAAGGACCTGCTACTGGACCCCTTTCTCCAGTCTGAAACTGATCATGGTTTATCAGGTCGATCTATGAAGCCTAACCATCGGTTGGGAAGCGCTAATGATAATAATGTTACTGGTAAAAACAGCAAGGACGACCTTGCCATGACAGGCAGAGATTTCATAGTACAAGGTCAGAGGAGAGACGTGAACACTATATTTCTTAAACTACGAATTGCAGACTCTTCAGGTAACTTCCGGAATATCCATTTCCCTTTTGATATTGAGGAGGACACAGCCATGGCTGTTGCGAGTGAAATGGTTCAGGAATTAGACCTCACAGATCAAGATGTTACAGCCATTGCTGCAATGATTGACTCAGAAATCCAATCCCTTATTCCGAGTTGGAGTTCAAATGAATTTCATGGAGATGAGTTTGATGAAGAGACACCACATCGTAAATCTGTTTCTGAATCTAGAGATGAGGCTTCACCCATGGCTTCTGATTCTCCCTCTTTGATCAATATCCTTACGTTGGAGAGATTACCTTCTGGTCGTAGATATTGGTGTACCTCTCCAAAATTTGTTCATGGGAGTTCTCCCCTGAGGCCTACTGCTTCTCATTTGTCTTCTATGATCACCAATTGTGACAGCCCCACTGCCACTTCTCCGGCTTCACCTTACCAGGAGGTTGATCAGTGCATTCGTAATGTTGTCAATGAGGAGAATGCTACAGACTTTACTAAATCACAACCAAGTCATATTTGTCTAACCGGGAATCTCCCTTCAAATAATGGAGGGACAATTTCAGAAGATAATGCACAGGGAGGCATAAAATCAGAGTGTATCCGCGTGATTGCCAATAATCTGGAAGATCTATTGATTAGACAAGAAAAAGAACTTGGTGAGCTTGGGAGGAAGCATAAATTGGAAGTTTCCGATCTTCTGAAGGAATTTGATCCTGAAACTCAAACAAAAATTGTAAATATGTGCAAGCTGAATAAGTCCTTTGAAAACGAACTCTGA 1377 0.4263 MRISTSLRRFSRQERYASEVKIGDLGLAAILFQARSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFQYPYAECTNAAQIYKKVTSGIKPASLAKVEDPQVKAFIEKCIANVSQRLSAKDLLLDPFLQSETDHGLSGRSMKPNHRLGSANDNNVTGKNSKDDLAMTGRDFIVQGQRRDVNTIFLKLRIADSSGNFRNIHFPFDIEEDTAMAVASEMVQELDLTDQDVTAIAAMIDSEIQSLIPSWSSNEFHGDEFDEETPHRKSVSESRDEASPMASDSPSLINILTLERLPSGRRYWCTSPKFVHGSSPLRPTASHLSSMITNCDSPTATSPASPYQEVDQCIRNVVNEENATDFTKSQPSHICLTGNLPSNNGGTISEDNAQGGIKSECIRVIANNLEDLLIRQEKELGELGRKHKLEVSDLLKEFDPETQTKIVNMCKLNKSFENEL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01982 458 Pfam Protein kinase domain 18 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01982 458 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 281 - -
Pte1g01982 458 MobiDBLite consensus disorder prediction 151 168 - -
Pte1g01982 458 Gene3D - 188 274 - -
Pte1g01982 458 MobiDBLite consensus disorder prediction 258 277 - -
Pte1g01982 458 Gene3D Transferase(Phosphotransferase) domain 1 11 142 - -
Pte1g01982 458 ProSiteProfiles Protein kinase domain profile. 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01982 458 MobiDBLite consensus disorder prediction 257 286 - -
Pte1g01982 458 MobiDBLite consensus disorder prediction 141 168 - -
Pte1g01982 458 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 192 246 IPR024678 GO:0004674|GO:0005524
Pte1g01982 458 SMART serkin_6 3 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g01982 458 SUPERFAMILY Protein kinase-like (PK-like) 19 342 IPR011009 -
Pte1g01982 458 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01982 Pte-Chr1 41055371 41059194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01982 19 373 MAP Kinase Kinase Kinase AT3G48260 52.603 1.71e-114 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pte1g01982 Pkinase 5.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01982 K08867 - qsa:O6P43_030822 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01982 1 41055371 41059194 Pte1g01982 1 41055371 41059194 RCT