Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g01981 | ATGGCAATATCCACAGCAACAGCTTCAGCTTCTTCAAAATTAATCTACCCGTACGCCTCTAAATCCTCATCTTCTCCTTCTTACTCACCTATCAACTCCATTTCTCTTTCCTCCTCTTCCCATATCAAACACAAATTGAGCCTTCTCTCCTCATCCTTCTGTAACCCTTCTGCAGTTCTTCATCTCGCGCCCACCACCTCTACCGGCACATCACGCCACCGCTCTTACACAGTCAAAGCCGCCCGTGAGAAGTTCGAACGGACCAAACCCCATGTCAACATTGGAACCATCGGTCACGTCGACCATGGGAAGACCACTCTTACAGCTGCTCTCACGATGGCCATGGCTGCTACCGGCAATAGTACCCCTAAGAAATACGATGAAATTGACAGTGCCCCAGAAGAGAGAGCCCGTGGAATTACCATTAACACTGCTTGTGTAGAGTACGAGACAGAAAACCGTCACTACGCCCATGTGGACTGCCCTGGTCATGCTGATTATGTCAAGAACATGATTACGGGTGCTGCTCAGATGGACGGTGCTATTCTCGTTGTTTCTGGTGCTGATGGACCCATGCCTCAGACCAAAGAACATATTTTACTGGCTAAGCAAGTGGGTGTACCCAATATGGTTGTATTTTTGAATAAACAGGATCAGGTGGATGATGAAGAGCTTCTTCAGCTTGTGGAATTAGAGGTGCGTGAGTTACTCACATCTTATGAATTTCCTGGCGATGATATACCCATTATCTCAGGTTCTGCTTTGTTGGCTTTGGAAGCGTTGATGGCTAATCCTACTCTTAAAAGGGGTGAAAATGAATGGGTCGATAAGATTTATGAACTCATGGACTCTGTAGATAGTTATATACCAATCCCTCAGCGTCAAGTCGATCTTCCATTTTTGCTTGCTATTGAAGATGTATACTCAGTTACAGGTCGTGGTACGGTGGCCACTGGTCGTATTGAGAGAGGCACAGTTACAGTTGGAGAACTTGTAGAAATTGTTGGTGTCAAGGATACTTCCACCACTACTGTTACTGGGGTAGAAATGTTTAGGAAAACTCTTGATCGTGGGCAGGCAGGAGACAATGTGGGTTTGTTGCTTAGAGGTGTTCAGAAGGATGATATCCAGAGAGGGATGGTTTTGGCTAAGCCTGCTTCTATCACCCCACACACTAAGTTTGAAGCCATTGTTTATGTGTTGAAGAAGGAAGAAGGTGGAAGGCACTCACCTTTCTTCTCGGGTTATAGACCACAGTTTTATATGAGGACTACTGATGTGACTGGGAAGGTTCTTACCATCAAGAATGACAAGGATGAGGAGTCAAAGATGGTTATGCCTGGAGACCGTGTCAAGATGGTTGTGGAAATCATATATCCAGTTGCTTGTGAGCAAGGAATGAGGTTTGCTATCAGAGAAGGTGGGAAGACCGTTGGAGCTGGTGTTATCCAGTCCATCATTGAATGA | 1467 | 0.4567 | MAISTATASASSKLIYPYASKSSSSPSYSPINSISLSSSSHIKHKLSLLSSSFCNPSAVLHLAPTTSTGTSRHRSYTVKAAREKFERTKPHVNIGTIGHVDHGKTTLTAALTMAMAATGNSTPKKYDEIDSAPEERARGITINTACVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLTSYEFPGDDIPIISGSALLALEALMANPTLKRGENEWVDKIYELMDSVDSYIPIPQRQVDLPFLLAIEDVYSVTGRGTVATGRIERGTVTVGELVEIVGVKDTSTTTVTGVEMFRKTLDRGQAGDNVGLLLRGVQKDDIQRGMVLAKPASITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVLTIKNDKDEESKMVMPGDRVKMVVEIIYPVACEQGMRFAIREGGKTVGAGVIQSIIE* | 489 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g01981 | 488 | SUPERFAMILY | Translation proteins | 294 | 390 | IPR009000 | - | |
Pte1g01981 | 488 | PANTHER | ELONGATION FACTOR TU-RELATED | 75 | 487 | - | - | |
Pte1g01981 | 488 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 85 | 308 | IPR027417 | - | |
Pte1g01981 | 488 | Pfam | Elongation factor Tu C-terminal domain | 387 | 486 | IPR004160 | - | |
Pte1g01981 | 488 | Hamap | Elongation factor Tu [tuf]. | 80 | 488 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Pte1g01981 | 488 | CDD | EFTU_III | 389 | 483 | - | - | |
Pte1g01981 | 488 | NCBIfam | elongation factor Tu | 81 | 488 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Pte1g01981 | 488 | FunFam | Elongation factor Tu | 80 | 292 | - | - | |
Pte1g01981 | 488 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 387 | 487 | IPR009001 | - | |
Pte1g01981 | 488 | Gene3D | Translation factors | 427 | 487 | - | - | |
Pte1g01981 | 488 | NCBIfam | small GTP-binding protein domain | 92 | 225 | IPR005225 | GO:0005525 | |
Pte1g01981 | 488 | Gene3D | - | 81 | 292 | IPR027417 | - | |
Pte1g01981 | 488 | FunFam | Elongation factor Tu | 427 | 487 | - | - | |
Pte1g01981 | 488 | PRINTS | GTP-binding elongation factor signature | 137 | 145 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | PRINTS | GTP-binding elongation factor signature | 210 | 219 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | PRINTS | GTP-binding elongation factor signature | 157 | 167 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | PRINTS | GTP-binding elongation factor signature | 173 | 184 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | PRINTS | GTP-binding elongation factor signature | 93 | 106 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 130 | 145 | IPR031157 | - | |
Pte1g01981 | 488 | Pfam | Elongation factor Tu GTP binding domain | 89 | 290 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | FunFam | Elongation factor Tu | 295 | 423 | - | - | |
Pte1g01981 | 488 | CDD | EFTU_II | 300 | 385 | IPR033720 | - | |
Pte1g01981 | 488 | Pfam | Elongation factor Tu domain 2 | 314 | 382 | IPR004161 | GO:0005525 | |
Pte1g01981 | 488 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 89 | 293 | IPR000795 | GO:0003924|GO:0005525 | |
Pte1g01981 | 488 | CDD | EF_Tu | 90 | 292 | IPR041709 | - | |
Pte1g01981 | 488 | Gene3D | Translation factors | 295 | 423 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g01981 | Pte-Chr1 | 41052871 | 41054337 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g01981 | 81 | 486 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 30.599 | 4.47e-44 | 159 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g01981 | K02358 | - | csav:115708909 | 750.355 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pte1g01981 | 1 | 41052871 | 41054337 | Pte1g01981 | 1 | 41052871 | 41054337 | RCT |