Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01967 ATGAAGCGTATCCAGAAGGGCCCTATTCGTGGTATCTCATTGAAACTCCAGGAAGAGGAGCGTGAGCGTCGTATGGACTTTGTTCCTGATGAGTCAGCAATGAAGATGGATGAGAGAAAGGACAGGAACCCAGGAACGATTTTCTCCAAGAAATCACATTATCGATGTGGCAAAGGGCAGGATGAGAATCAGATTGAAAGTTGGACTGGCATTTGCTGTGGTTTTCTTGTGCATTGGGATGGGAGCTTTGATTTTGTATTTTGTGGAGAACCTAGATTGGATTGA 285 0.4456 MKRIQKGPIRGISLKLQEEERERRMDFVPDESAMKMDERKDRNPGTIFSKKSHYRCGKGQDENQIESWTGICCGFLVHWDGSFDFVFCGEPRLD* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01967 94 PANTHER 40S RIBOSOMAL PROTEIN S17 1 38 IPR001210 GO:0003735|GO:0005840|GO:0006412
Pte1g01967 94 Pfam Ribosomal S17 1 38 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01967 Pte-Chr1 40953843 40954127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01967 1 40 Cytoplasmic Ribosomal Protein Gene Family AT2G05220 90.000 1.77e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01967 K02962 - cave:132183700 75.485