Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01959 ATGCAGAGCACGGCTTTCACTCTTTCTCCTTCCATTCCTCTTCTAAAATCTCGCAGGCACTTGACTTCGTCTCCTGCTTCTGCCTTCCACGTCCAGAATCGCTTCGATCCTATAAATATCTATGCTTCTTGTTCAAAGCACAGAGAGTTCATCTCTGATGTATCCGCTCGCCGATCCTGGTCATTTGGGTCCTCTTCTTCCGATTTCAAACTCAGGCCATGGACTTCGTTTTCCTCAATTGCTTTATCTGATTCTGATTCAAACCGGTTTCAGGTGAAGGCCACTTCCGTGCCAGATAGTGCTGGGGAGAGCAGTTCTGCTTCTAGTAGCTTGTCCAAAACGTTAGAACTTGGAGCCCTTTTTGGACTCTGGTATCTCTTCAATATATACTTTAACATCTACAACAAGCAGGTTTTGAAGGTCTACCATTTCCCCGCCACTATTACTGCAATCCAATTTGCTGTTGGCTCGGTCCTTGTATTATTCATGTGGGGTTTTAATCTCTATAAAAGGCCTAAAATCAGTGGCTCCCAGCTTGCAGCAATATTACCTCTTGCCGTGGTGCACACTTTGGGGAATCTCTTCACTAACATGAGTCTTGGAAAGGTGGCGGTGTCATTCACTCACACCATTAAGGCTATGGAGCCTTTCTTTTCAGTCGTCCTCTCTGCAATGTTTCTTGGCGAGATGCCCACGGGATGGGTGGTAACTTCCCTTTTGCCCATTGTTGGTGGAGTGGCTTTGGCATCAGTTACAGAGGCGTCTTTTAATTGGGCTGGATTTTGGAGTGCCATGGCTTCCAATTTGACAAACCAATCACGTAATGTCCTTAGCAAGAAGGTCATGGTTAGAAAAGAGGACTCCATGGACAACATTACTCTCTTCTCAATTATAACGCTTATGTCCTTCTTGCTATTGGCTCCTGTGACTGTCTTTTTGGAGGGTGTGAAATTTAGCCCTGCATACTTGCAATCTGCTGGATTAGACGTTAAGCAGTTACTCACCAGGTCTCTTGTTGCTGCACTCTGTTTTCACGCTTATCAACAGGTTTCGTACATGATATTACAAAGAGTTTCACCTGTCACGCATTCTGTTGGCAATTGTGTAAAGAGAGTTGTGGTTATTGTTAGCTCTGTAATCTTCTTTAAAACTCCTGTCTCTCCTATTAATGCCATTGGGACTGGTATTGCTCTTGCTGGCGTTTTTCTCTATTCAAGGGTGAAGCGAATTAAACCAAAATCAAAGTCAGCCTGA 1254 0.4434 MQSTAFTLSPSIPLLKSRRHLTSSPASAFHVQNRFDPINIYASCSKHREFISDVSARRSWSFGSSSSDFKLRPWTSFSSIALSDSDSNRFQVKATSVPDSAGESSSASSSLSKTLELGALFGLWYLFNIYFNIYNKQVLKVYHFPATITAIQFAVGSVLVLFMWGFNLYKRPKISGSQLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAMFLGEMPTGWVVTSLLPIVGGVALASVTEASFNWAGFWSAMASNLTNQSRNVLSKKVMVRKEDSMDNITLFSIITLMSFLLLAPVTVFLEGVKFSPAYLQSAGLDVKQLLTRSLVAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPINAIGTGIALAGVFLYSRVKRIKPKSKSA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01959 417 PANTHER SOLUTE CARRIER FAMILY 35 116 411 - -
Pte1g01959 417 Pfam Triose-phosphate Transporter family 116 405 IPR004853 -
Pte1g01959 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 160 251 - -
Pte1g01959 417 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 115 415 IPR004696 GO:0016020|GO:0022857|GO:0055085
Pte1g01959 417 SUPERFAMILY Multidrug resistance efflux transporter EmrE 305 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01959 Pte-Chr1 40869268 40872618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01959 1 418 Antiporters AT5G33320 70.686 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01959 K15283 - pop:7457744 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte3g00238 3 2042643 2047427 Pte1g01959 1 40869268 40872618 RCT
Pte1g01959 1 40869268 40872618 Pte1g01959 1 40869268 40872618 RCT