Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01947 ATGACTATTAAAGGAAGCACAAATCAGGCTTGTGCTGTCTGCAAATATCAAAGAAGGAAATGCTCAAAAGAATGCACTCTTTCCCCATATTTTCCTGCAGATCGGCCTAAGCAATTCCAGAATGCTCATCGGCTGTTCGGTGTTCGCAATATAACGAGAATCATAGAGAAAGTTCATCCTGATCAGAGGGAGGAGGCAATGAAATCCATTATATATGAGTCTAACATGCGAGCCCAGTTCCCCGTTCATGGGTGTCTAGGCATTATCTGGCAGTACCATAACCAATTAAAACAAACCGTAGAAGAGCTTAATTATGTGAATACACAGCTTGCATTCTACAAGGATAACTATCAGTACCAAATACCAAATTCCACCCCACCCTATTCACCATCCTCGCAACTAAACTTTGGCATTGCATCCCAATATGATGGCGGTGTCGCCATGTTAAATGACTTTCTCTTAGGAAATGCTGGTGTGCTGAATGGAGCATGCTTGGAAGGCAACGACATGAATGTCCAACCTTTACCTACGTATGATATTGTTCATGGGATCTCTGATGCAAATCCTATGGTTATTCCACCTGGTTACGTTGACATCCCTTTCGATGCCATTGTTGATGATAGACAGTCATATATCGATCCAAAAGAGGCTTGTGAGTCCAGTGCGGAATCATCATTCAAGGGCACAATAAATCAAATCGAACCAATGTCATCTGAGAACGAACTCAAGAGTGCAGCTGCATGTTTCAGCTTAACGAATTGA 762 0.4226 MTIKGSTNQACAVCKYQRRKCSKECTLSPYFPADRPKQFQNAHRLFGVRNITRIIEKVHPDQREEAMKSIIYESNMRAQFPVHGCLGIIWQYHNQLKQTVEELNYVNTQLAFYKDNYQYQIPNSTPPYSPSSQLNFGIASQYDGGVAMLNDFLLGNAGVLNGACLEGNDMNVQPLPTYDIVHGISDANPMVIPPGYVDIPFDAIVDDRQSYIDPKEACESSAESSFKGTINQIEPMSSENELKSAAACFSLTN* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01947 253 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Pte1g01947 253 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Pte1g01947 253 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01947 Pte-Chr1 40651932 40652796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01947 1 114 AS2 family AT3G47870 56.140 1.27e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte1g01947 LOB 3.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01947 - - pxb:103928492 260.381