Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g01931 ATGGCAGCTCGCAGGCTCTCCTCTCTGCTTCGTCGCTCCTTTTTTACTCAGCCATCTCCTTCATTTGGATTGGCTTCGCTGATTCACTCTCCTGTGAAGAACTCGGCATGGTTGAAAAGCATAAGCAGGTTTAGTACTTCTTCAGCAGAAGCACTCATCACTCCTCCTGTTCATATAAAATACACCCAGCATCTTATCAACGGTCAGTTTGTAGATGCTGCATCAGGGAAAACATTCCCAACATATGACCCGCGTACTGGGGAGGTGATTGCTCATGTCGCGGAAGGAGATGAAGAGGATATCAACCGTGCAGTAGCTGCAGCACGCAAGGCCTTCGATGAGGGACCATGGCCAAAGATGTCTCCTTATGAAAGATCAAAGATATTGTTGCGTGTTGCGGATTTAATCGAGAGTCACAGCGATGAGCTCGCAACATTGGAGACTTGGGATAATGGGAAGCCTTATGAGCAGGCTGCCCAAGCTGAATTGCCTATGCTTGTGCGTTTGTTTAGATATTACGCAGGTTGGGCAGACAAAATTCATGGTCTAACTGTCCCTGCTGATGGAAACTACCATGTGCAAACATTGCATGAACCTATTGGAGTGGCAGGCCAAATTATCCCATGGAACTTTCCTCTCCTCATGTTTGTTTGGAAAGTCGGACCTGCATTAGCTTGTGGTAATACCATAGTTCTCAAGACTGCAGAGCAAACTCCTCTAACTGCGCTCTATGTGGGAAAGTTATTTCAAGAGGCTGGTCTTCCTCCAGGTGTCTTGAATATAGTTTCTGGCTATGGTCCAACTGCAGGTGCTGCTCTTGCCAGTCATATGGATGTGGACAAGCTTGCTTTCACAGGATCAACTGAAACGGGAAAGGTTGTACTTGAATTGGCGGCAAAAAGCAATCTTAAGCCAGTAACCTTGGAGCTTGGTGGCAAATCACCTTTCATCATATGTGAGGATGCTGATATTGACAAGGCTGTAGAACTTGCTCACTTTGCTTTGTTCTTTAATCAGGGGCAATGCTGCTGTGCTGGTTCTCGAACCTTCGTGCATGAACGCGTATATGACGAGTTCTTGGAGAAGGCAACGGCACGTGCTCTGAAACGCAATGTTGGCGATCCCTTCAAGAAGGGTGTCGAGCAGGGTCCTCAAATTGACTCGGAGCAATTTCAAAAGATATTAAAGTACATAAAGTCTGGTGTCGACAGCAATGCAAAGCTTGAATGTGGAGGTGAAAGGTTTGGCAACAAAGGCTACTTCATTCAGCCAACAGTCTTCTCAAATGTCTCGGATGATATGTTGATAGCACAAGACGAAATATTTGGTCCAGTGCAGTCCGTCTTGAAATTCAAAGACATTAATGAAGTGATAAGAAGGGCAAACGCGACGCGCTATGGCCTAGCTGCTGGGGTGTTTACTAAAAATGTGGATACAGCCAACACGTTGATGAGGGCACTGCGTGCAGGCACTGTGTGGATCAACTGCTTCAATGTTTTTGACGCTGCAATCCCATTTGGTGGCTACAAGATGAGTGGGATAGGCAGGGAGAAGGGAATCTACAGCCTCAACAATTATTTACAAGTGAAAGCAGTTGTCACACCTTTGAAGAATGCTGCATGGCTATAA 1629 0.4616 MAARRLSSLLRRSFFTQPSPSFGLASLIHSPVKNSAWLKSISRFSTSSAEALITPPVHIKYTQHLINGQFVDAASGKTFPTYDPRTGEVIAHVAEGDEEDINRAVAAARKAFDEGPWPKMSPYERSKILLRVADLIESHSDELATLETWDNGKPYEQAAQAELPMLVRLFRYYAGWADKIHGLTVPADGNYHVQTLHEPIGVAGQIIPWNFPLLMFVWKVGPALACGNTIVLKTAEQTPLTALYVGKLFQEAGLPPGVLNIVSGYGPTAGAALASHMDVDKLAFTGSTETGKVVLELAAKSNLKPVTLELGGKSPFIICEDADIDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFLEKATARALKRNVGDPFKKGVEQGPQIDSEQFQKILKYIKSGVDSNAKLECGGERFGNKGYFIQPTVFSNVSDDMLIAQDEIFGPVQSVLKFKDINEVIRRANATRYGLAAGVFTKNVDTANTLMRALRAGTVWINCFNVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLKNAAWL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g01931 542 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 336 347 IPR016160 GO:0016491
Pte1g01931 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 66 530 IPR016162 GO:0016491
Pte1g01931 542 FunFam Aldehyde dehydrogenase, putative 504 530 - -
Pte1g01931 542 SUPERFAMILY ALDH-like 56 535 IPR016161 GO:0016491
Pte1g01931 542 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 501 IPR016163 GO:0016620
Pte1g01931 542 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 308 315 IPR029510 GO:0016491
Pte1g01931 542 CDD ALDH_F2BC 59 534 - -
Pte1g01931 542 FunFam Mitochondrial aldehyde dehydrogenase 2 314 503 - -
Pte1g01931 542 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 46 532 - -
Pte1g01931 542 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 66 327 - -
Pte1g01931 542 Pfam Aldehyde dehydrogenase family 70 532 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g01931 Pte-Chr1 40489646 40493548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g01931 1 543 Aldehyde Dehydrogenase Gene Family AT3G48000 79.083 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g01931 K00128 - qsu:112020173 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g01931 1 40489646 40493548 Pte1g01931 1 40489646 40493548 RCT